Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm21562-201ENSMUST00000177888 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21539-201ENSMUST00000177925 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21599-201ENSMUST00000178249 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm23660-201ENSMUST00000178362 79 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21914-201ENSMUST00000178452 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21723-201ENSMUST00000178692 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21916-201ENSMUST00000178771 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21801-201ENSMUST00000178865 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21633-201ENSMUST00000178941 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm24088-201ENSMUST00000179100 79 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21821-201ENSMUST00000179646 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21588-201ENSMUST00000180074 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21780-201ENSMUST00000180128 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21572-201ENSMUST00000180134 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm21529-201ENSMUST00000180175 498 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm10105-201ENSMUST00000184601 270 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm29370-202ENSMUST00000187476 499 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm38356-201ENSMUST00000194313 408 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm18971-201ENSMUST00000197240 374 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm43901-201ENSMUST00000203247 453 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm4036-201ENSMUST00000220842 626 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx56Q9D0R4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm15026-201ENSMUST00000119219 458 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm25325-201ENSMUST00000122559 86 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm24757-201ENSMUST00000176987 371 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm7837-201ENSMUST00000190873 412 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm43238-201ENSMUST00000196463 359 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm45119-201ENSMUST00000207612 199 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Mir132-201ENSMUST00000083603 66 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx56Q9D0R4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
Ddx56Q9D0R4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
Ddx56Q9D0R4 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm5762-201ENSMUST00000119204 258 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm14656-201ENSMUST00000120342 502 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Defa-ps13-201ENSMUST00000120695 204 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm13409-201ENSMUST00000122072 546 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm25105-201ENSMUST00000122477 130 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm22718-201ENSMUST00000122701 315 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm23666-201ENSMUST00000158053 116 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm22839-201ENSMUST00000158436 304 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm8580-201ENSMUST00000160295 464 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm17117-201ENSMUST00000163665 299 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm27470-201ENSMUST00000184070 210 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm27582-201ENSMUST00000184084 126 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm37428-201ENSMUST00000193886 137 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm45513-201ENSMUST00000210228 376 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm2436-201ENSMUST00000219562 774 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm26066-201ENSMUST00000083385 109 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddx56Q9D0R4 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.7□□□□□ -1.82
Ddx56Q9D0R4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms