Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm29104-201ENSMUST00000186304 222 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm29429-201ENSMUST00000187071 121 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm44726-201ENSMUST00000203427 217 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm7039-201ENSMUST00000205138 346 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm22979-201ENSMUST00000082609 159 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ddx28Q9CWT6 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm24119-201ENSMUST00000103979 246 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm14530-201ENSMUST00000122391 333 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm13901-201ENSMUST00000137252 468 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm22560-201ENSMUST00000157332 120 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm27893-201ENSMUST00000184408 194 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm28506-201ENSMUST00000189937 150 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm37455-201ENSMUST00000191993 529 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm29809-201ENSMUST00000218423 493 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.81□□□□□ -1.96
Ddx28Q9CWT6 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm24118-201ENSMUST00000103972 126 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm13085-201ENSMUST00000118356 171 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm26275-201ENSMUST00000157101 268 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm20672-201ENSMUST00000176605 261 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Mir6386-201ENSMUST00000183558 104 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Mir6371-201ENSMUST00000184470 111 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm28534-201ENSMUST00000187744 676 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm37085-201ENSMUST00000193780 196 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm43550-201ENSMUST00000200597 303 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Mir193a-201ENSMUST00000083461 66 ntBASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ddx28Q9CWT6 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm22497-201ENSMUST00000104499 131 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm14848-201ENSMUST00000121850 467 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm25220-201ENSMUST00000157546 95 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm16111-201ENSMUST00000162128 285 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm19932-201ENSMUST00000177033 313 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm25314-201ENSMUST00000178810 79 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm9892-201ENSMUST00000182415 992 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm26968-201ENSMUST00000182894 481 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm29602-201ENSMUST00000186887 442 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm43431-201ENSMUST00000198577 340 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 Gm7495-201ENSMUST00000215099 426 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.79□□□□□ -1.96
Ddx28Q9CWT6 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms