Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26458-201ENSMUST00000082832 128 ntBASIC2.82□□□□□ -1.96
Smc1aQ9CU62 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Smc1aQ9CU62 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm22270-201ENSMUST00000104034 132 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm24430-201ENSMUST00000104077 104 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm25529-201ENSMUST00000104850 92 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm11221-201ENSMUST00000117230 597 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm2830-201ENSMUST00000140330 385 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm22666-201ENSMUST00000158717 164 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm8580-201ENSMUST00000160295 464 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm24897-201ENSMUST00000179033 107 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm38311-201ENSMUST00000192945 165 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm37807-201ENSMUST00000194310 190 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm43264-201ENSMUST00000202284 325 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm17991-201ENSMUST00000208139 297 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Mir127-201ENSMUST00000093568 70 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Smc1aQ9CU62 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm17538-201ENSMUST00000168236 327 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm28163-201ENSMUST00000187099 325 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm28169-201ENSMUST00000190342 345 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Mir378a-201ENSMUST00000198300 66 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm43626-201ENSMUST00000198575 162 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Gm23645-201ENSMUST00000083228 108 ntBASIC2.8□□□□□ -1.96
Smc1aQ9CU62 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Smc1aQ9CU62 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm15846-201ENSMUST00000116022 320 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm14899-201ENSMUST00000118673 548 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm11357-201ENSMUST00000119758 954 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm6574-201ENSMUST00000120037 362 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm12044-201ENSMUST00000120335 213 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm11438-201ENSMUST00000121582 189 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm25220-201ENSMUST00000157546 95 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm23223-201ENSMUST00000158119 127 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm23568-201ENSMUST00000177960 92 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm24829-201ENSMUST00000179245 92 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm38154-201ENSMUST00000195444 340 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm44519-201ENSMUST00000206486 122 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Smc1aQ9CU62 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.78□□□□□ -1.96
Smc1aQ9CU62 Gm23118-201ENSMUST00000122657 187 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms