Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm14428-201ENSMUST00000120408 822 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm26256-201ENSMUST00000122499 186 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm22236-201ENSMUST00000157093 106 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm22037-201ENSMUST00000157280 296 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm24908-201ENSMUST00000157294 127 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm25866-201ENSMUST00000158245 112 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm43171-201ENSMUST00000199882 291 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm44083-201ENSMUST00000203114 337 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm44161-201ENSMUST00000203532 253 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 AC183096.1-201ENSMUST00000226392 130 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Gm23727-201ENSMUST00000083352 164 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Snora69-201ENSMUST00000083708 131 ntBASIC1.74□□□□□ -2.13
RTRAFQ9CQE8 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm22936-201ENSMUST00000103955 126 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm26147-201ENSMUST00000104479 114 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm22496-201ENSMUST00000104493 88 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm12934-201ENSMUST00000119221 343 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm15029-201ENSMUST00000119742 199 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm12096-201ENSMUST00000121149 829 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm16355-201ENSMUST00000128606 231 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm25153-201ENSMUST00000157118 156 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm24768-201ENSMUST00000158512 94 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm22093-201ENSMUST00000158980 111 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm23933-201ENSMUST00000178405 79 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm25175-201ENSMUST00000178712 79 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm37946-201ENSMUST00000192064 347 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Igkv8-31-201ENSMUST00000200040 372 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm44519-201ENSMUST00000206486 122 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm45860-201ENSMUST00000212700 334 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm19326-201ENSMUST00000219818 326 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm24707-201ENSMUST00000082812 107 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm25582-201ENSMUST00000083412 110 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.73□□□□□ -2.13
RTRAFQ9CQE8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm23744-201ENSMUST00000104231 149 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm14593-201ENSMUST00000119948 294 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm24937-201ENSMUST00000122597 134 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm23111-201ENSMUST00000122652 105 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm16588-201ENSMUST00000162889 355 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm22716-201ENSMUST00000177596 107 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm36984-201ENSMUST00000192770 235 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm43286-201ENSMUST00000197420 424 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm43405-201ENSMUST00000198642 337 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm44794-201ENSMUST00000206550 411 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm45232-201ENSMUST00000207811 162 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm45382-201ENSMUST00000210607 151 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm18000-201ENSMUST00000212153 800 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RTRAFQ9CQE8 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
RTRAFQ9CQE8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm12191-201ENSMUST00000118307 348 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm12878-201ENSMUST00000118744 332 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm15497-201ENSMUST00000119137 551 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm9703-201ENSMUST00000119573 343 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm26027-201ENSMUST00000122725 268 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm24716-201ENSMUST00000157524 104 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm26215-201ENSMUST00000158584 139 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Gm2855-201ENSMUST00000166765 456 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Mir6335-201ENSMUST00000184081 98 ntBASIC1.71□□□□□ -2.14
RTRAFQ9CQE8 Mir6950-201ENSMUST00000184438 73 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms