Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.08□□□□□ -2.08
Use1Q9CQ56 Gm24698-201ENSMUST00000083883 130 ntBASIC2.08□□□□□ -2.08
Use1Q9CQ56 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm23803-201ENSMUST00000104610 132 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm11845-201ENSMUST00000117886 327 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm13602-201ENSMUST00000122405 493 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm25808-201ENSMUST00000122784 284 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm25294-201ENSMUST00000122791 104 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm27532-201ENSMUST00000183726 113 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm28399-201ENSMUST00000186221 318 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm29604-201ENSMUST00000187176 163 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm28572-201ENSMUST00000187444 318 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm36966-201ENSMUST00000192217 413 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm33354-201ENSMUST00000195448 906 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm37029-201ENSMUST00000195773 239 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm43652-201ENSMUST00000196219 675 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm43708-201ENSMUST00000198857 961 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Mir7215-201ENSMUST00000200383 51 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm44954-201ENSMUST00000208513 227 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm5374-201ENSMUST00000222868 657 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm22806-201ENSMUST00000082738 136 ntBASIC2.07□□□□□ -2.08
Use1Q9CQ56 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Use1Q9CQ56 Gm23747-201ENSMUST00000104228 131 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm15844-201ENSMUST00000118016 576 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm16428-201ENSMUST00000121193 723 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm24627-201ENSMUST00000122764 138 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm25066-201ENSMUST00000158145 123 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm24056-201ENSMUST00000158617 146 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm27249-201ENSMUST00000185049 328 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm44050-201ENSMUST00000204263 527 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm7065-201ENSMUST00000222150 474 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm6109-201ENSMUST00000223297 348 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.06□□□□□ -2.08
Use1Q9CQ56 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Use1Q9CQ56 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm24982-201ENSMUST00000104456 132 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm13355-201ENSMUST00000117996 317 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm12721-201ENSMUST00000120621 268 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 AA413626-201ENSMUST00000121125 494 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm14770-201ENSMUST00000122197 312 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm25339-201ENSMUST00000157458 232 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm25335-201ENSMUST00000158043 103 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm25368-201ENSMUST00000158847 131 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm22093-201ENSMUST00000158980 111 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm17063-201ENSMUST00000168135 456 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm24137-201ENSMUST00000180055 79 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm22391-201ENSMUST00000180356 79 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm28825-201ENSMUST00000186233 238 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm42647-201ENSMUST00000195939 459 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm42739-201ENSMUST00000200687 226 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Mir465-201ENSMUST00000093563 74 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.05□□□□□ -2.08
Use1Q9CQ56 Gm22779-201ENSMUST00000104085 107 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm11065-201ENSMUST00000111462 228 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Use1Q9CQ56 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm15896-201ENSMUST00000118045 440 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm12235-201ENSMUST00000118596 170 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm14292-201ENSMUST00000118761 456 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm15312-201ENSMUST00000118827 271 ntBASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.04□□□□□ -2.08
Use1Q9CQ56 Gm17377-201ENSMUST00000165184 207 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms