Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim11Q99PQ2 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim11Q99PQ2 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm8666-201ENSMUST00000117517 292 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm26001-201ENSMUST00000157989 103 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm22450-201ENSMUST00000179641 107 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm27952-201ENSMUST00000184748 105 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm29022-201ENSMUST00000190702 225 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Snord21-201ENSMUST00000082519 94 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm26071-201ENSMUST00000083261 107 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Mir383-201ENSMUST00000083523 70 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm24521-201ENSMUST00000083958 107 ntBASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
Trim11Q99PQ2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.65□□□□□ -1.66
Trim11Q99PQ2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm26026-201ENSMUST00000122726 123 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm24005-201ENSMUST00000158459 296 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm24131-201ENSMUST00000158539 107 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Mir6540-201ENSMUST00000184886 108 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm37162-201ENSMUST00000191708 551 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm37617-201ENSMUST00000194309 159 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm8274-201ENSMUST00000219820 463 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm22685-201ENSMUST00000082848 106 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Mir10a-201ENSMUST00000083585 110 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim11Q99PQ2 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23472-201ENSMUST00000101806 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Mir690-201ENSMUST00000102110 109 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm24987-201ENSMUST00000104453 134 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm12191-201ENSMUST00000118307 348 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm9703-201ENSMUST00000119573 343 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm14008-201ENSMUST00000120483 274 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm13581-201ENSMUST00000120675 278 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm14770-201ENSMUST00000122197 312 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23789-201ENSMUST00000122536 301 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm25621-201ENSMUST00000157223 114 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm26187-201ENSMUST00000157693 101 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm17187-201ENSMUST00000164622 410 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Mir3090-201ENSMUST00000175597 87 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm24497-201ENSMUST00000177868 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm28924-201ENSMUST00000190012 241 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm43193-201ENSMUST00000197732 441 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm45006-201ENSMUST00000206078 690 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm18441-201ENSMUST00000223539 617 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm25813-201ENSMUST00000082748 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm24950-201ENSMUST00000082768 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23444-201ENSMUST00000082922 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23971-201ENSMUST00000083317 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23454-201ENSMUST00000083332 133 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Mir302d-201ENSMUST00000083513 66 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm23849-201ENSMUST00000083833 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm26316-201ENSMUST00000083886 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm10343-201ENSMUST00000096279 348 ntBASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim11Q99PQ2 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Gm23178-201ENSMUST00000116782 95 ntBASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim11Q99PQ2 Gm25863-201ENSMUST00000158249 329 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms