Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm14899-201ENSMUST00000118673 548 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm15312-201ENSMUST00000118827 271 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm14049-201ENSMUST00000121009 636 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm22382-201ENSMUST00000158185 130 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm20656-201ENSMUST00000176925 518 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm28058-201ENSMUST00000186421 264 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm45754-201ENSMUST00000212380 279 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Gm24412-201ENSMUST00000083426 109 ntBASIC1.36□□□□□ -2.19
Nup35Q8R4R6 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Nup35Q8R4R6 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm25168-201ENSMUST00000104189 132 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm15110-201ENSMUST00000117545 881 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm15112-201ENSMUST00000120152 860 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm16359-201ENSMUST00000124511 289 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm24969-201ENSMUST00000180331 79 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm26864-201ENSMUST00000181346 156 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm32175-201ENSMUST00000193641 346 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Gm25411-201ENSMUST00000083760 151 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Nup35Q8R4R6 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.35□□□□□ -2.19
Nup35Q8R4R6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm14867-201ENSMUST00000120156 866 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm12096-201ENSMUST00000121149 829 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm14694-201ENSMUST00000121856 282 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm22192-201ENSMUST00000175128 85 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm44391-201ENSMUST00000198490 93 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm42739-201ENSMUST00000200687 226 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm44524-201ENSMUST00000203899 271 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm44182-201ENSMUST00000204052 115 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm25632-201ENSMUST00000083112 85 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Mir107-201ENSMUST00000083660 87 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Gm23040-201ENSMUST00000083869 163 ntBASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Nup35Q8R4R6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.34□□□□□ -2.2
Nup35Q8R4R6 Gm15526-201ENSMUST00000112504 204 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Mir1195-201ENSMUST00000116818 98 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm25279-201ENSMUST00000122608 133 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm25621-201ENSMUST00000157223 114 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm26348-201ENSMUST00000157528 240 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm24878-201ENSMUST00000158782 104 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm17085-201ENSMUST00000165425 502 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm5329-201ENSMUST00000186898 463 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm29429-201ENSMUST00000187071 121 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm31511-201ENSMUST00000193134 657 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Gm37987-201ENSMUST00000194999 825 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.33□□□□□ -2.2
Nup35Q8R4R6 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.33□□□□□ -2.2
Nup35Q8R4R6 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
Nup35Q8R4R6 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms