Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm13567-201ENSMUST00000118026 247 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm14037-201ENSMUST00000120576 313 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm22204-201ENSMUST00000122654 327 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm24629-201ENSMUST00000122762 89 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm22889-201ENSMUST00000158639 58 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm26219-201ENSMUST00000175216 71 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm23921-201ENSMUST00000175258 107 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm6625-201ENSMUST00000177870 272 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm21960-201ENSMUST00000181924 452 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Mir6907-201ENSMUST00000183764 71 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm27796-201ENSMUST00000183863 261 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm8296-201ENSMUST00000185597 524 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm42672-201ENSMUST00000197821 352 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm44473-201ENSMUST00000204039 152 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm44521-201ENSMUST00000206469 217 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm26225-201ENSMUST00000082508 135 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm26457-201ENSMUST00000082678 78 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm22806-201ENSMUST00000082738 136 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm22353-201ENSMUST00000083918 136 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.62□□□□□ -1.83
Clrn1Q8K445 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.62□□□□□ -1.83
Clrn1Q8K445 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm7853-201ENSMUST00000100708 478 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm15613-201ENSMUST00000118396 326 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm14282-201ENSMUST00000119484 240 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm25391-201ENSMUST00000157342 134 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm24014-201ENSMUST00000157728 157 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm20698-201ENSMUST00000175657 233 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm23864-201ENSMUST00000177607 107 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm25939-201ENSMUST00000179876 191 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm38332-201ENSMUST00000194189 147 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm44657-201ENSMUST00000208568 450 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.61□□□□□ -1.83
Clrn1Q8K445 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Clrn1Q8K445 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm26476-201ENSMUST00000122618 313 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm26148-201ENSMUST00000157430 68 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm28744-201ENSMUST00000189939 340 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Clrn1Q8K445 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm43583-201ENSMUST00000199235 303 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm43441-201ENSMUST00000201458 205 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm44099-201ENSMUST00000203299 112 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm8942-201ENSMUST00000217892 400 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm10042-201ENSMUST00000079884 78 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm24948-201ENSMUST00000082866 207 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.6□□□□□ -1.83
Clrn1Q8K445 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Clrn1Q8K445 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Clrn1Q8K445 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Clrn1Q8K445 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Clrn1Q8K445 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.59□□□□□ -1.83
Clrn1Q8K445 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Clrn1Q8K445 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Clrn1Q8K445 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.59□□□□□ -1.83
Clrn1Q8K445 Gm24683-201ENSMUST00000104840 88 ntBASIC3.59□□□□□ -1.83
Clrn1Q8K445 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.59□□□□□ -1.83
Clrn1Q8K445 Gm14551-201ENSMUST00000120802 256 ntBASIC3.59□□□□□ -1.83
Clrn1Q8K445 Gm8244-201ENSMUST00000121254 264 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms