Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm12902-201ENSMUST00000118389 322 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm12787-201ENSMUST00000119234 396 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm12806-201ENSMUST00000119384 268 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm11849-201ENSMUST00000121293 261 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm22380-201ENSMUST00000157479 95 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm25909-201ENSMUST00000157619 121 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm22849-201ENSMUST00000157713 307 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24853-201ENSMUST00000158026 121 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm23068-201ENSMUST00000158239 293 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Snord93-201ENSMUST00000175580 71 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Mir6986-201ENSMUST00000184483 58 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Mir6899-201ENSMUST00000184798 64 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Mir6933-201ENSMUST00000184982 81 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Mir6943-201ENSMUST00000185186 66 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm44600-201ENSMUST00000208540 111 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24037-201ENSMUST00000082871 180 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Gm5670-201ENSMUST00000093546 372 ntBASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ccdc28bQ8CEG5 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm26396-201ENSMUST00000104093 132 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm14825-201ENSMUST00000113538 701 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm15106-201ENSMUST00000119691 821 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm14694-201ENSMUST00000121856 282 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm11229-201ENSMUST00000121993 437 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm22956-201ENSMUST00000122520 80 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm23887-201ENSMUST00000122683 172 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24546-201ENSMUST00000158652 102 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm22136-201ENSMUST00000158751 268 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm20794-201ENSMUST00000177626 628 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm28744-201ENSMUST00000189939 340 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm19193-201ENSMUST00000190263 590 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm43669-201ENSMUST00000198229 436 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm15235-201ENSMUST00000200572 194 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Gm45673-201ENSMUST00000210293 358 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm12386-201ENSMUST00000117380 688 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm9043-201ENSMUST00000119677 314 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm15272-201ENSMUST00000120865 233 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm14736-201ENSMUST00000121470 336 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24419-201ENSMUST00000157875 332 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24730-201ENSMUST00000158228 117 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm26195-201ENSMUST00000175035 101 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm20718-201ENSMUST00000176058 259 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Mir6951-201ENSMUST00000183910 75 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm27773-201ENSMUST00000184087 78 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm45687-201ENSMUST00000209454 155 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm26056-201ENSMUST00000083043 104 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm22364-201ENSMUST00000083097 98 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Gm23741-201ENSMUST00000097237 171 ntBASIC2.75□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm14657-201ENSMUST00000117461 302 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm11386-201ENSMUST00000117761 347 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm26099-201ENSMUST00000157248 109 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm24436-201ENSMUST00000157889 302 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Nron-204ENSMUST00000158971 370 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm17919-201ENSMUST00000173344 312 ntBASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.74□□□□□ -1.97
Ccdc28bQ8CEG5 Gm6801-201ENSMUST00000190697 339 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms