Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm23264-201ENSMUST00000083372 107 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Snord7-201ENSMUST00000083781 97 ntBASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nup88Q8CEC0 Gm15282-201ENSMUST00000117707 300 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm12053-201ENSMUST00000119022 252 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm14638-201ENSMUST00000121338 216 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm22793-201ENSMUST00000157227 330 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm23124-201ENSMUST00000157650 107 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm23068-201ENSMUST00000158239 293 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm23022-201ENSMUST00000158768 180 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm8338-201ENSMUST00000163928 363 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Mir7242-201ENSMUST00000183710 79 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm10193-201ENSMUST00000188288 231 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm35558-203ENSMUST00000222264 204 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.16□□□□□ -1.9
Nup88Q8CEC0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nup88Q8CEC0 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.15□□□□□ -1.9
Nup88Q8CEC0 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Nup88Q8CEC0 Gm22831-201ENSMUST00000102473 109 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm22782-201ENSMUST00000104082 132 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm2066-201ENSMUST00000118046 389 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm14736-201ENSMUST00000121470 336 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm6568-201ENSMUST00000122274 697 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm25153-201ENSMUST00000157118 156 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm24438-201ENSMUST00000157893 115 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm23704-201ENSMUST00000158844 340 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm24816-201ENSMUST00000175311 151 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm27660-201ENSMUST00000184028 208 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Mir6405-201ENSMUST00000184584 124 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm8041-201ENSMUST00000199755 616 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Gm2436-201ENSMUST00000219562 774 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Mir208a-201ENSMUST00000083498 83 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Snord38a-201ENSMUST00000083746 71 ntBASIC3.15□□□□□ -1.91
Nup88Q8CEC0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm22658-201ENSMUST00000104196 155 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm25500-201ENSMUST00000104426 123 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm26341-201ENSMUST00000104561 134 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm15399-201ENSMUST00000118055 724 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm14897-201ENSMUST00000118213 207 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm12806-201ENSMUST00000119384 268 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm14821-201ENSMUST00000121975 435 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm24922-201ENSMUST00000158511 102 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm28399-201ENSMUST00000186221 318 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm29429-201ENSMUST00000187071 121 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm28572-201ENSMUST00000187444 318 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm19202-201ENSMUST00000198096 808 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm44256-201ENSMUST00000203304 335 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm6030-201ENSMUST00000078768 402 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm26446-201ENSMUST00000082455 103 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm26458-201ENSMUST00000082832 128 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm22572-201ENSMUST00000082985 105 ntBASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Nup88Q8CEC0 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm26147-201ENSMUST00000104479 114 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm22496-201ENSMUST00000104493 88 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm12386-201ENSMUST00000117380 688 ntBASIC3.13□□□□□ -1.91
Nup88Q8CEC0 Gm13085-201ENSMUST00000118356 171 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms