Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm26243-201ENSMUST00000179260 107 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm23860-201ENSMUST00000179446 132 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm37290-201ENSMUST00000195775 339 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm18346-201ENSMUST00000216782 325 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm5175-202ENSMUST00000219699 529 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm23296-201ENSMUST00000082555 107 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm24859-201ENSMUST00000082729 107 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm25578-201ENSMUST00000083406 104 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Gm4017-201ENSMUST00000084813 338 ntBASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Atg4aQ8C9S8 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm24889-201ENSMUST00000104388 132 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm11849-201ENSMUST00000121293 261 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm13368-201ENSMUST00000122443 430 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm23068-201ENSMUST00000158239 293 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm26195-201ENSMUST00000175035 101 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Mir7093-201ENSMUST00000184195 101 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm43704-201ENSMUST00000196164 496 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm5001-201ENSMUST00000204361 331 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm44399-201ENSMUST00000205043 226 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm24043-201ENSMUST00000083108 116 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm24817-201ENSMUST00000093672 105 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Gm23741-201ENSMUST00000097237 171 ntBASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Atg4aQ8C9S8 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm2066-201ENSMUST00000118046 389 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm13228-201ENSMUST00000118937 634 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm15231-201ENSMUST00000119174 447 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm16533-201ENSMUST00000140035 228 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm25637-201ENSMUST00000157529 107 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm25373-201ENSMUST00000158156 115 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm21737-201ENSMUST00000178112 664 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm21815-201ENSMUST00000178213 664 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm20874-201ENSMUST00000178356 663 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm21744-201ENSMUST00000178403 662 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm20901-201ENSMUST00000180177 664 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Mir8103-201ENSMUST00000183945 107 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm27490-201ENSMUST00000184754 128 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm28282-201ENSMUST00000186072 186 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm21647-201ENSMUST00000189755 664 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm29330-201ENSMUST00000190032 699 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm28337-201ENSMUST00000190425 666 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Trbv24-201ENSMUST00000194614 347 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm6615-201ENSMUST00000199426 631 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm44726-201ENSMUST00000203427 217 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm9818-201ENSMUST00000050900 255 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm22245-201ENSMUST00000082479 103 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm23650-201ENSMUST00000083355 70 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Atg4aQ8C9S8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm26341-201ENSMUST00000104561 134 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm13331-201ENSMUST00000117500 448 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm14624-201ENSMUST00000117746 192 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm22718-201ENSMUST00000122701 315 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm22452-201ENSMUST00000122804 104 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm24061-201ENSMUST00000157489 120 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm24724-201ENSMUST00000158230 107 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm20718-201ENSMUST00000176058 259 ntBASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Atg4aQ8C9S8 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms