Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26348-201ENSMUST00000157528 240 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm6374-201ENSMUST00000159051 788 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm27540-201ENSMUST00000184950 187 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm45367-201ENSMUST00000210171 347 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm45860-201ENSMUST00000212700 334 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm7117-201ENSMUST00000071515 387 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm22704-201ENSMUST00000083027 137 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Gm26128-201ENSMUST00000083170 110 ntBASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp40Q8BWR4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm26018-201ENSMUST00000104406 128 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm13729-201ENSMUST00000120328 406 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm12721-201ENSMUST00000120621 268 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm14875-201ENSMUST00000120881 319 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm14841-201ENSMUST00000121067 758 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm14101-201ENSMUST00000121502 473 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm12956-201ENSMUST00000122184 414 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm26045-201ENSMUST00000157862 97 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm24501-201ENSMUST00000158452 62 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm22435-201ENSMUST00000158552 128 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm23209-201ENSMUST00000158667 110 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm21673-201ENSMUST00000186640 436 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm21135-201ENSMUST00000189023 436 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm45031-201ENSMUST00000206800 288 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Gm22828-201ENSMUST00000083768 107 ntBASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Usp40Q8BWR4 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Usp40Q8BWR4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp40Q8BWR4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
Usp40Q8BWR4 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm14566-201ENSMUST00000118915 321 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm23671-201ENSMUST00000157472 103 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm24784-201ENSMUST00000157640 62 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm23120-201ENSMUST00000157654 287 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm24739-201ENSMUST00000158855 292 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm25081-201ENSMUST00000082534 108 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm8074-201ENSMUST00000095071 252 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.65□□□□□ -1.67
Usp40Q8BWR4 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Usp40Q8BWR4 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Mir147-201ENSMUST00000102354 79 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm13329-201ENSMUST00000117063 265 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm13167-201ENSMUST00000118554 578 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm25967-201ENSMUST00000157168 147 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm24191-201ENSMUST00000157977 122 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm24546-201ENSMUST00000158652 102 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm27851-201ENSMUST00000183529 63 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm27997-201ENSMUST00000184942 69 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm28163-201ENSMUST00000187099 325 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm28921-201ENSMUST00000190219 378 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm23455-201ENSMUST00000083331 100 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 AF357428-201ENSMUST00000083815 69 ntBASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Usp40Q8BWR4 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm15951-201ENSMUST00000118377 400 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm14940-201ENSMUST00000119309 495 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm14591-201ENSMUST00000120407 518 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm22722-201ENSMUST00000157467 132 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm23892-201ENSMUST00000158105 130 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm22833-201ENSMUST00000158292 132 ntBASIC4.63□□□□□ -1.67
Usp40Q8BWR4 Gm8580-201ENSMUST00000160295 464 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms