Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm23897-201ENSMUST00000158110 158 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm23476-201ENSMUST00000158881 274 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm10074-201ENSMUST00000174543 249 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm44520-201ENSMUST00000205447 802 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm17976-201ENSMUST00000184037 1909 ntBASIC0.84□□□□□ -2.28
Ttc28Q80XJ3 Gm14669-201ENSMUST00000118841 250 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm11819-201ENSMUST00000122192 372 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm16331-201ENSMUST00000144274 498 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm27477-201ENSMUST00000184649 143 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm6060-201ENSMUST00000188671 251 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm19237-201ENSMUST00000205036 1132 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 AC153662.1-201ENSMUST00000222220 270 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 AC173481.1-201ENSMUST00000223351 270 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm13210-201ENSMUST00000121483 273 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm17064-201ENSMUST00000167690 452 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Crs-ps-201ENSMUST00000203723 760 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm44585-201ENSMUST00000207150 607 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm17990-201ENSMUST00000211728 553 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Mir129-2-201ENSMUST00000083577 90 ntBASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Ttc28Q80XJ3 Gm25526-201ENSMUST00000104332 132 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm11935-201ENSMUST00000118608 399 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm15659-201ENSMUST00000118881 341 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm12304-201ENSMUST00000120312 385 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm22107-201ENSMUST00000122548 100 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm25220-201ENSMUST00000157546 95 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm9613-201ENSMUST00000171662 196 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Mir574-201ENSMUST00000103854 78 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm11404-201ENSMUST00000120872 494 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm12731-201ENSMUST00000120932 268 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm22026-201ENSMUST00000122735 281 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm24768-201ENSMUST00000158512 94 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm25730-201ENSMUST00000178753 165 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm27265-201ENSMUST00000183559 77 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm46994-201ENSMUST00000221523 219 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Ear14-201ENSMUST00000049559 468 ntBASIC0.82□□□□□ -2.28
Ttc28Q80XJ3 Gm26089-201ENSMUST00000157898 107 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm3027-201ENSMUST00000167579 451 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Mir6374-201ENSMUST00000184003 107 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm34015-201ENSMUST00000194908 451 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm43541-201ENSMUST00000197208 581 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 AC132384.9-201ENSMUST00000218085 277 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm37598-201ENSMUST00000194506 1301 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm17538-201ENSMUST00000168236 327 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Mir3109-201ENSMUST00000175301 88 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Mir7077-201ENSMUST00000183991 57 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm27419-201ENSMUST00000184576 109 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm21064-202ENSMUST00000190583 278 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm36974-201ENSMUST00000194200 1071 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 AC126673.2-201ENSMUST00000221052 686 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 AC130222.1-201ENSMUST00000221198 256 ntBASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Ttc28Q80XJ3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Mir3096-201ENSMUST00000116685 71 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm14786-201ENSMUST00000117127 944 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm11572-201ENSMUST00000119164 120 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm14069-201ENSMUST00000120815 229 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm25198-201ENSMUST00000178574 110 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm28647-201ENSMUST00000188416 197 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm28169-201ENSMUST00000190342 345 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm37523-201ENSMUST00000194901 412 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm25856-201ENSMUST00000082786 75 ntBASIC0.8□□□□□ -2.28
Ttc28Q80XJ3 Gm42942-201ENSMUST00000196086 1328 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms