Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm26149-201ENSMUST00000157432 108 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm23704-201ENSMUST00000158844 340 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm27445-201ENSMUST00000184484 72 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm45375-201ENSMUST00000210338 280 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm45312-201ENSMUST00000210566 311 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm22507-201ENSMUST00000082773 160 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Gm25856-201ENSMUST00000082786 75 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Ubfd1Q78JW9 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ubfd1Q78JW9 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Ubfd1Q78JW9 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm13541-201ENSMUST00000119519 283 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm14269-201ENSMUST00000120455 306 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm14678-201ENSMUST00000121396 482 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm14581-201ENSMUST00000121726 198 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm14578-201ENSMUST00000122166 391 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21842-201ENSMUST00000177552 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21626-201ENSMUST00000177791 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21562-201ENSMUST00000177888 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21539-201ENSMUST00000177925 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21599-201ENSMUST00000178249 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21914-201ENSMUST00000178452 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm22910-201ENSMUST00000178568 132 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21723-201ENSMUST00000178692 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21916-201ENSMUST00000178771 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21801-201ENSMUST00000178865 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21633-201ENSMUST00000178941 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21821-201ENSMUST00000179646 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21588-201ENSMUST00000180074 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21780-201ENSMUST00000180128 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21572-201ENSMUST00000180134 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm21529-201ENSMUST00000180175 498 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm29574-201ENSMUST00000186226 696 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm28828-201ENSMUST00000186601 696 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm29370-202ENSMUST00000187476 499 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm28159-201ENSMUST00000190296 696 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm37313-201ENSMUST00000191673 290 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm43529-201ENSMUST00000199178 412 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.33□□□□□ -1.88
Ubfd1Q78JW9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm13717-201ENSMUST00000119868 365 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm11363-201ENSMUST00000121672 548 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm14972-201ENSMUST00000121780 364 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm22956-201ENSMUST00000122520 80 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm27905-201ENSMUST00000184005 207 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm28016-201ENSMUST00000184594 196 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm42925-201ENSMUST00000197359 285 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm43284-201ENSMUST00000200103 253 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm5023-201ENSMUST00000217442 587 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ubfd1Q78JW9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Mir673-201ENSMUST00000102361 91 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Gm12782-201ENSMUST00000117519 727 ntBASIC3.31□□□□□ -1.88
Ubfd1Q78JW9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 138.3 ms