Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ddx55Q6ZPL9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Ddx55Q6ZPL9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.86□□□□□ -1.79
Ddx55Q6ZPL9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Ddx55Q6ZPL9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Ddx55Q6ZPL9 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Snord70-201ENSMUST00000104157 87 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm14897-201ENSMUST00000118213 207 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm14761-201ENSMUST00000121363 262 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm16354-201ENSMUST00000155376 150 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm23585-201ENSMUST00000157656 102 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm22257-201ENSMUST00000158687 301 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm25360-201ENSMUST00000178786 191 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm28717-201ENSMUST00000189950 315 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm43115-201ENSMUST00000196244 160 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm45119-201ENSMUST00000207612 199 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm45704-201ENSMUST00000212582 403 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 AC154390.1-201ENSMUST00000225629 277 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx55Q6ZPL9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm24374-201ENSMUST00000104394 106 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm22195-201ENSMUST00000116861 108 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm13761-201ENSMUST00000117238 807 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm11577-201ENSMUST00000118030 737 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm11904-201ENSMUST00000120562 248 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm14810-201ENSMUST00000121628 486 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm26101-201ENSMUST00000157246 105 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm22722-201ENSMUST00000157467 132 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm22098-201ENSMUST00000157930 85 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm24847-201ENSMUST00000158032 108 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm22833-201ENSMUST00000158292 132 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm15914-201ENSMUST00000161922 309 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm7953-201ENSMUST00000168278 469 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm24862-201ENSMUST00000179103 79 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm23310-201ENSMUST00000179105 79 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm25461-201ENSMUST00000179293 79 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Mir6383-201ENSMUST00000184545 116 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm43393-201ENSMUST00000200147 194 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm19252-201ENSMUST00000204705 305 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Gm24764-201ENSMUST00000083686 199 ntBASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ddx55Q6ZPL9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Ddx55Q6ZPL9 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Ddx55Q6ZPL9 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Mir1198-201ENSMUST00000116995 121 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm13692-201ENSMUST00000120774 371 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm13153-201ENSMUST00000120969 637 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm22322-201ENSMUST00000157151 111 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm22037-201ENSMUST00000157280 296 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm24504-201ENSMUST00000157679 100 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm22538-201ENSMUST00000158169 299 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm23402-201ENSMUST00000178130 107 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm27624-201ENSMUST00000185047 177 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm37128-201ENSMUST00000192599 232 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm42526-201ENSMUST00000198956 393 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Gm43955-201ENSMUST00000204332 142 ntBASIC3.83□□□□□ -1.8
Ddx55Q6ZPL9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms