Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm25243-201ENSMUST00000174912 207 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm26194-201ENSMUST00000175036 71 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm27385-201ENSMUST00000184747 104 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm28414-201ENSMUST00000190111 294 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm9227-201ENSMUST00000194733 566 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm43746-201ENSMUST00000200028 317 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm22247-201ENSMUST00000082476 131 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Smarca1Q6PGB8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm25373-201ENSMUST00000158156 115 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm20794-201ENSMUST00000177626 628 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm21744-201ENSMUST00000178403 662 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm21171-201ENSMUST00000180048 673 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm28700-201ENSMUST00000187614 579 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm28843-201ENSMUST00000189198 678 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm29546-201ENSMUST00000191171 678 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm19252-201ENSMUST00000204705 305 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm22249-201ENSMUST00000082485 136 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 AF357341-201ENSMUST00000083088 75 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Mir137-201ENSMUST00000083635 73 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Olfr895-201ENSMUST00000093864 951 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smarca1Q6PGB8 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm13228-201ENSMUST00000118937 634 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm15106-201ENSMUST00000119691 821 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm5287-201ENSMUST00000120666 598 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm14629-201ENSMUST00000122428 144 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm24839-201ENSMUST00000122602 107 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm24787-201ENSMUST00000157380 123 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm23380-201ENSMUST00000158448 103 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm37417-201ENSMUST00000195257 454 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Mir184-201ENSMUST00000083662 69 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarca1Q6PGB8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm12787-201ENSMUST00000119234 396 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm15466-201ENSMUST00000122299 333 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm8114-201ENSMUST00000172225 484 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm26928-201ENSMUST00000182674 572 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm27317-201ENSMUST00000183533 95 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm28628-201ENSMUST00000187006 264 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm28629-201ENSMUST00000187309 263 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm45687-201ENSMUST00000209454 155 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm45395-201ENSMUST00000209891 559 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm23738-201ENSMUST00000082828 171 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.36□□□□□ -1.87
Smarca1Q6PGB8 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm13504-201ENSMUST00000117490 316 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 Gm13806-201ENSMUST00000117822 325 ntBASIC3.35□□□□□ -1.87
Smarca1Q6PGB8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms