Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm44011-201ENSMUST00000203336 394 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Ear14-201ENSMUST00000049559 468 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm10343-201ENSMUST00000096279 348 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.73□□□□□ -1.97
Snrnp40Q6PE01 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm23137-201ENSMUST00000157559 107 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm23068-201ENSMUST00000158239 293 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Cfap61-214ENSMUST00000167179 183 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm17538-201ENSMUST00000168236 327 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm22633-201ENSMUST00000179834 107 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm21729-201ENSMUST00000180058 664 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm21853-201ENSMUST00000180071 664 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm27313-201ENSMUST00000183500 142 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm29495-201ENSMUST00000189319 664 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm28414-201ENSMUST00000190111 294 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm45105-201ENSMUST00000207824 397 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Gm25135-201ENSMUST00000082648 143 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Mir452-201ENSMUST00000093629 85 ntBASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Snrnp40Q6PE01 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm22750-201ENSMUST00000102076 103 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm13728-201ENSMUST00000117471 400 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm14765-201ENSMUST00000121954 326 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm14530-201ENSMUST00000122391 333 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm13368-201ENSMUST00000122443 430 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm23559-201ENSMUST00000157824 103 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm20794-201ENSMUST00000177626 628 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm21744-201ENSMUST00000178403 662 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm22631-201ENSMUST00000179656 94 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm21171-201ENSMUST00000180048 673 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm28700-201ENSMUST00000187614 579 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm28843-201ENSMUST00000189198 678 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm29546-201ENSMUST00000191171 678 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm19252-201ENSMUST00000204705 305 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm30155-201ENSMUST00000223458 339 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm9762-201ENSMUST00000036976 444 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm4945-201ENSMUST00000075152 453 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm24948-201ENSMUST00000082866 207 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm22572-201ENSMUST00000082985 105 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Rny3-201ENSMUST00000083011 102 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Snord7-201ENSMUST00000083781 97 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.71□□□□□ -1.98
Snrnp40Q6PE01 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm24780-201ENSMUST00000157635 143 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm24901-201ENSMUST00000158125 110 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm9071-201ENSMUST00000165915 474 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm18486-201ENSMUST00000184040 298 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Mir8096-201ENSMUST00000184526 127 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm8151-201ENSMUST00000184817 871 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm37616-201ENSMUST00000193974 322 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm42818-201ENSMUST00000198869 987 ntBASIC2.7□□□□□ -1.98
Snrnp40Q6PE01 Gm42578-201ENSMUST00000199960 194 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms