Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm29216-201ENSMUST00000187117 492 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm38311-201ENSMUST00000192945 165 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm42818-201ENSMUST00000198869 987 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm2628-201ENSMUST00000218019 426 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.8□□□□□ -1.96
Herc4Q6PAV2 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm4945-201ENSMUST00000075152 453 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm6030-201ENSMUST00000078768 402 ntBASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Herc4Q6PAV2 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26504-201ENSMUST00000102033 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm11891-201ENSMUST00000121241 619 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm23981-201ENSMUST00000157136 106 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26502-201ENSMUST00000177732 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm25350-201ENSMUST00000177849 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm23446-201ENSMUST00000177977 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26201-201ENSMUST00000178047 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm24711-201ENSMUST00000178062 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm24609-201ENSMUST00000178166 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm23265-201ENSMUST00000178321 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm22812-201ENSMUST00000178329 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26246-201ENSMUST00000178388 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm25155-201ENSMUST00000178450 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm24760-201ENSMUST00000178530 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm22285-201ENSMUST00000178576 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm22417-201ENSMUST00000178656 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26270-201ENSMUST00000178690 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm23313-201ENSMUST00000178931 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm23089-201ENSMUST00000178947 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm24153-201ENSMUST00000179280 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm25597-201ENSMUST00000179388 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm25816-201ENSMUST00000179764 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26188-201ENSMUST00000179963 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm26433-201ENSMUST00000180227 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm22128-201ENSMUST00000180346 94 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm44923-201ENSMUST00000206673 85 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm44903-201ENSMUST00000206840 130 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Mir208a-201ENSMUST00000083498 83 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.79□□□□□ -1.96
Herc4Q6PAV2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm26341-201ENSMUST00000104561 134 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm14785-201ENSMUST00000120185 539 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm14069-201ENSMUST00000120815 229 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm14736-201ENSMUST00000121470 336 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm15167-201ENSMUST00000121997 187 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm24780-201ENSMUST00000157635 143 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm23704-201ENSMUST00000158844 340 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Mir6363-201ENSMUST00000184880 114 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Trbv24-201ENSMUST00000194614 347 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm44476-201ENSMUST00000196225 91 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm42164-201ENSMUST00000198881 379 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm42578-201ENSMUST00000199960 194 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm29848-201ENSMUST00000203107 295 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm43955-201ENSMUST00000204332 142 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Gm44060-201ENSMUST00000204440 410 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Snord7-201ENSMUST00000083781 97 ntBASIC2.78□□□□□ -1.96
Herc4Q6PAV2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.78□□□□□ -1.96
Herc4Q6PAV2 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Herc4Q6PAV2 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms