Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Usp49Q6P9L4 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Usp49Q6P9L4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.5□□□□□ -1.85
Usp49Q6P9L4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm24275-201ENSMUST00000116780 146 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm12191-201ENSMUST00000118307 348 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm9703-201ENSMUST00000119573 343 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm22038-201ENSMUST00000157277 242 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm24857-201ENSMUST00000158061 310 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm24737-201ENSMUST00000158861 100 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm8207-201ENSMUST00000171204 502 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm24168-201ENSMUST00000178825 107 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm27783-201ENSMUST00000183534 105 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm43035-201ENSMUST00000197626 517 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm43932-201ENSMUST00000204499 52 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm44718-201ENSMUST00000206886 359 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm30674-201ENSMUST00000214523 392 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 mt-Td-201ENSMUST00000082404 70 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm23345-201ENSMUST00000083817 150 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm10343-201ENSMUST00000096279 348 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.49□□□□□ -1.85
Usp49Q6P9L4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm22496-201ENSMUST00000104493 88 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm14852-201ENSMUST00000120065 647 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm13901-201ENSMUST00000137252 468 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm26278-201ENSMUST00000157098 132 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm25982-201ENSMUST00000157920 101 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm7925-201ENSMUST00000166690 401 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm25243-201ENSMUST00000174912 207 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm25175-201ENSMUST00000178712 79 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Mir8106-201ENSMUST00000184520 139 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Mir6383-201ENSMUST00000184545 116 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm29350-201ENSMUST00000189141 541 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm7858-201ENSMUST00000190177 622 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm37313-201ENSMUST00000191673 290 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm37085-201ENSMUST00000193780 196 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm43238-201ENSMUST00000196463 359 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm44393-201ENSMUST00000197418 138 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm44336-201ENSMUST00000203696 468 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm45375-201ENSMUST00000210338 280 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm7692-201ENSMUST00000213534 409 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm25411-201ENSMUST00000083760 151 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Olfr575-201ENSMUST00000084812 957 ntBASIC3.48□□□□□ -1.85
Usp49Q6P9L4 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm23422-201ENSMUST00000102000 107 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Mir759-201ENSMUST00000103254 98 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm25308-201ENSMUST00000104171 158 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm12238-201ENSMUST00000127764 124 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm6265-201ENSMUST00000149263 231 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm9696-202ENSMUST00000191541 830 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm37290-201ENSMUST00000195775 339 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Mir691-201ENSMUST00000199719 78 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm22154-201ENSMUST00000083844 131 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.47□□□□□ -1.85
Usp49Q6P9L4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Usp49Q6P9L4 Gm13228-201ENSMUST00000118937 634 ntBASIC3.46□□□□□ -1.86
Usp49Q6P9L4 Gm15106-201ENSMUST00000119691 821 ntBASIC3.46□□□□□ -1.86
Usp49Q6P9L4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms