Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm42665-201ENSMUST00000202100 586 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 Gm18729-201ENSMUST00000217230 621 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 Gm46193-201ENSMUST00000219399 364 ntBASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Tpm4Q6IRU2 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm14867-201ENSMUST00000120156 866 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm14600-201ENSMUST00000121032 630 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm25335-201ENSMUST00000158043 103 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm9071-201ENSMUST00000165915 474 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm4468-201ENSMUST00000170206 294 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm42672-201ENSMUST00000197821 352 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm2676-201ENSMUST00000207279 606 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Gm22683-201ENSMUST00000082854 137 ntBASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Tpm4Q6IRU2 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm13343-201ENSMUST00000116474 105 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm14868-201ENSMUST00000117840 216 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm15223-201ENSMUST00000120989 826 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm14049-201ENSMUST00000121009 636 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm17085-201ENSMUST00000165425 502 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm25120-201ENSMUST00000180148 79 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Mir6376-201ENSMUST00000185149 131 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm28755-201ENSMUST00000185773 199 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Gm29262-201ENSMUST00000190084 196 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Snord7-201ENSMUST00000083781 97 ntBASIC1.8□□□□□ -2.12
Tpm4Q6IRU2 Mir873a-201ENSMUST00000104863 77 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm12191-201ENSMUST00000118307 348 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm14358-201ENSMUST00000118458 403 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm26256-201ENSMUST00000122499 186 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm25637-201ENSMUST00000157529 107 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Mir6997-201ENSMUST00000184313 71 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm27959-201ENSMUST00000185172 111 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm43659-201ENSMUST00000200894 628 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm43578-201ENSMUST00000201250 459 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm44041-201ENSMUST00000203678 396 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.79□□□□□ -2.12
Tpm4Q6IRU2 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm25624-201ENSMUST00000157222 275 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm17162-201ENSMUST00000168538 473 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm32175-201ENSMUST00000193641 346 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm23727-201ENSMUST00000083352 164 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.78□□□□□ -2.12
Tpm4Q6IRU2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Tpm4Q6IRU2 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Tpm4Q6IRU2 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms