Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm14906-201ENSMUST00000119265 390 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.59□□□□□ -1.99
Six1Q62231 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.59□□□□□ -1.99
Six1Q62231 Gm22755-201ENSMUST00000157143 100 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm25283-201ENSMUST00000157272 77 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm24552-201ENSMUST00000158646 103 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm9071-201ENSMUST00000165915 474 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Six1Q62231 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.59□□□□□ -1.99
Six1Q62231 Gm37658-201ENSMUST00000192672 315 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm18964-201ENSMUST00000193013 563 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm32222-201ENSMUST00000203296 298 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm44011-201ENSMUST00000203336 394 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Six1Q62231 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.59□□□□□ -1.99
Six1Q62231 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Six1Q62231 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm26228-201ENSMUST00000082512 107 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm25080-201ENSMUST00000082526 107 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm25518-201ENSMUST00000083864 107 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.59□□□□□ -1.99
Six1Q62231 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Six1Q62231 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.59□□□□□ -2
Six1Q62231 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Six1Q62231 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Six1Q62231 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Six1Q62231 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Six1Q62231 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Six1Q62231 Mir466k-201ENSMUST00000116774 122 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm12793-201ENSMUST00000119268 292 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm8880-201ENSMUST00000121800 454 ntBASIC2.58□□□□□ -2
Six1Q62231 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.58□□□□□ -2
Six1Q62231 Gm22633-201ENSMUST00000179834 107 ntBASIC2.58□□□□□ -2
Six1Q62231 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm3852-201ENSMUST00000182781 264 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm27532-201ENSMUST00000183726 113 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm27505-201ENSMUST00000185071 110 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm21673-201ENSMUST00000186640 436 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm21135-201ENSMUST00000189023 436 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm43264-201ENSMUST00000202284 325 ntBASIC2.58□□□□□ -2
Six1Q62231 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.58□□□□□ -2
Six1Q62231 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.58□□□□□ -2
Six1Q62231 Gm4921-201ENSMUST00000219804 992 ntBASIC2.58□□□□□ -2
Six1Q62231 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.58□□□□□ -2
Six1Q62231 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.58□□□□□ -2
Six1Q62231 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Six1Q62231 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Six1Q62231 Gm23741-201ENSMUST00000097237 171 ntBASIC2.58□□□□□ -2
Six1Q62231 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.58□□□□□ -2
Six1Q62231 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Six1Q62231 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
Six1Q62231 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.58□□□□□ -2
Six1Q62231 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Six1Q62231 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.57□□□□□ -2
Six1Q62231 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.57□□□□□ -2
Six1Q62231 Gm14392-201ENSMUST00000120332 401 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm14413-201ENSMUST00000122158 408 ntBASIC2.57□□□□□ -2
Six1Q62231 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Six1Q62231 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.57□□□□□ -2
Six1Q62231 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.57□□□□□ -2
Six1Q62231 Gm26214-201ENSMUST00000158581 107 ntBASIC2.57□□□□□ -2
Six1Q62231 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.57□□□□□ -2
Six1Q62231 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.57□□□□□ -2
Six1Q62231 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm23186-201ENSMUST00000180078 107 ntBASIC2.57□□□□□ -2
Six1Q62231 Mir8106-201ENSMUST00000184520 139 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm29216-201ENSMUST00000187117 492 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Six1Q62231 Gm28211-201ENSMUST00000190920 315 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm8747-201ENSMUST00000195392 751 ntBASIC2.57□□□□□ -2
Six1Q62231 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.57□□□□□ -2
Six1Q62231 Gm45273-201ENSMUST00000211559 281 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm2436-201ENSMUST00000219562 774 ntBASIC2.57□□□□□ -2
Six1Q62231 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.57□□□□□ -2
Six1Q62231 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.57□□□□□ -2
Six1Q62231 Gm23614-201ENSMUST00000082598 107 ntBASIC2.57□□□□□ -2
Six1Q62231 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.57□□□□□ -2
Six1Q62231 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Six1Q62231 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.57□□□□□ -2
Six1Q62231 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.57□□□□□ -2
Six1Q62231 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.56□□□□□ -2
Six1Q62231 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six1Q62231 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.56□□□□□ -2
Six1Q62231 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.56□□□□□ -2
Six1Q62231 Gm24670-201ENSMUST00000104154 132 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm14558-201ENSMUST00000117458 381 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm7327-201ENSMUST00000120925 652 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm16428-201ENSMUST00000121193 723 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm11849-201ENSMUST00000121293 261 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm11384-201ENSMUST00000121376 303 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm12238-201ENSMUST00000127764 124 ntBASIC2.56□□□□□ -2
Six1Q62231 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.56□□□□□ -2
Six1Q62231 Gm24691-201ENSMUST00000157762 140 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm23068-201ENSMUST00000158239 293 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm24210-201ENSMUST00000158263 133 ntBASIC2.56□□□□□ -2
Six1Q62231 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms