Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm17946-201ENSMUST00000186856 538 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trim27Q62158 Gm37771-201ENSMUST00000193121 265 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 Gm18341-201ENSMUST00000197538 622 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.17□□□□□ -1.9
Trim27Q62158 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.17□□□□□ -1.9
Trim27Q62158 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trim27Q62158 Gm10088-201ENSMUST00000074116 423 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.17□□□□□ -1.9
Trim27Q62158 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm22771-201ENSMUST00000104449 91 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm12225-201ENSMUST00000117995 298 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm12096-201ENSMUST00000121149 829 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm14366-201ENSMUST00000121970 730 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm23600-201ENSMUST00000157260 71 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm26215-201ENSMUST00000158584 139 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm22633-201ENSMUST00000179834 107 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm27470-201ENSMUST00000184070 210 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Mir6917-201ENSMUST00000184111 61 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm18296-201ENSMUST00000192475 783 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm37616-201ENSMUST00000193974 322 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm32222-201ENSMUST00000203296 298 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm44223-201ENSMUST00000204854 114 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm44399-201ENSMUST00000205043 226 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm26446-201ENSMUST00000082455 103 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm24948-201ENSMUST00000082866 207 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim27Q62158 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.16□□□□□ -1.9
Trim27Q62158 Gm24670-201ENSMUST00000104154 132 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Gm11891-201ENSMUST00000121241 619 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
Trim27Q62158 Gm13602-201ENSMUST00000122405 493 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim27Q62158 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Mir3965-201ENSMUST00000175570 69 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Mir6363-201ENSMUST00000184880 114 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim27Q62158 Gm6615-201ENSMUST00000199426 631 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim27Q62158 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim27Q62158 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.15□□□□□ -1.91
Trim27Q62158 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim27Q62158 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim27Q62158 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim27Q62158 Gm24122-201ENSMUST00000104107 132 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm13720-201ENSMUST00000120741 196 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm12876-201ENSMUST00000120975 408 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm23137-201ENSMUST00000157559 107 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm26393-201ENSMUST00000157625 129 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm26414-201ENSMUST00000157674 269 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm24958-201ENSMUST00000158009 97 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm23059-201ENSMUST00000158978 107 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm20794-201ENSMUST00000177626 628 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm21744-201ENSMUST00000178403 662 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm21171-201ENSMUST00000180048 673 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm29413-201ENSMUST00000186019 880 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim27Q62158 Gm28700-201ENSMUST00000187614 579 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm29639-201ENSMUST00000188375 580 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm28843-201ENSMUST00000189198 678 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm28404-201ENSMUST00000190242 453 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm28437-201ENSMUST00000190277 783 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trim27Q62158 Gm29546-201ENSMUST00000191171 678 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm19252-201ENSMUST00000204705 305 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.14□□□□□ -1.91
Trim27Q62158 Gm19140-201ENSMUST00000209790 421 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.14□□□□□ -1.91
Trim27Q62158 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim27Q62158 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim27Q62158 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Trim27Q62158 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.14□□□□□ -1.91
Trim27Q62158 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim27Q62158 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim27Q62158 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Trim27Q62158 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim27Q62158 Gm26147-201ENSMUST00000104479 114 ntBASIC3.13□□□□□ -1.91
Trim27Q62158 Gm14940-201ENSMUST00000119309 495 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms