Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm24671-201ENSMUST00000104159 158 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm14897-201ENSMUST00000118213 207 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm14841-201ENSMUST00000121067 758 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm23886-201ENSMUST00000122684 313 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm23000-201ENSMUST00000157083 139 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm24914-201ENSMUST00000157285 313 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm23716-201ENSMUST00000157348 144 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm24409-201ENSMUST00000157881 152 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm22766-201ENSMUST00000158372 99 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm8114-201ENSMUST00000172225 484 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm29231-201ENSMUST00000179850 319 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm9765-201ENSMUST00000043170 321 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ClpbQ60649 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ClpbQ60649 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
ClpbQ60649 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
ClpbQ60649 Gm25257-201ENSMUST00000083907 110 ntBASIC3.12□□□□□ -1.91
ClpbQ60649 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ClpbQ60649 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ClpbQ60649 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm25728-201ENSMUST00000104525 159 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm13541-201ENSMUST00000119519 283 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm14629-201ENSMUST00000122428 144 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm24839-201ENSMUST00000122602 107 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm26275-201ENSMUST00000157101 268 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm24138-201ENSMUST00000157572 114 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm23752-201ENSMUST00000157584 115 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm25335-201ENSMUST00000158043 103 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm24724-201ENSMUST00000158230 107 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Mir3106-201ENSMUST00000175401 82 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm21171-201ENSMUST00000180048 673 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm27374-201ENSMUST00000183660 81 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm28700-201ENSMUST00000187614 579 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm29352-201ENSMUST00000188054 544 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm28661-201ENSMUST00000188231 681 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm8242-202ENSMUST00000193056 475 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm7871-201ENSMUST00000195346 618 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm6059-201ENSMUST00000196903 340 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm43402-201ENSMUST00000197159 159 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm43472-201ENSMUST00000200175 154 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm18015-201ENSMUST00000214879 316 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm19326-201ENSMUST00000219818 326 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm7422-201ENSMUST00000220115 640 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ClpbQ60649 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ClpbQ60649 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ClpbQ60649 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.11□□□□□ -1.91
ClpbQ60649 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ClpbQ60649 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ClpbQ60649 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ClpbQ60649 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
ClpbQ60649 Mir673-201ENSMUST00000102361 91 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
ClpbQ60649 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ClpbQ60649 Gm24376-201ENSMUST00000104399 127 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm12782-201ENSMUST00000117519 727 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm14624-201ENSMUST00000117746 192 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm13085-201ENSMUST00000118356 171 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm14574-201ENSMUST00000120644 279 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm14578-201ENSMUST00000122166 391 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.1□□□□□ -1.91
ClpbQ60649 Gm3470-201ENSMUST00000160819 420 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm26430-201ENSMUST00000178054 107 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm27869-201ENSMUST00000184327 122 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.1□□□□□ -1.91
ClpbQ60649 Gm37399-201ENSMUST00000195224 416 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm43723-201ENSMUST00000196886 189 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm35931-201ENSMUST00000203931 448 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm44825-201ENSMUST00000207557 150 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm44598-201ENSMUST00000207566 150 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm6012-201ENSMUST00000210821 730 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.1□□□□□ -1.91
ClpbQ60649 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ClpbQ60649 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm22364-201ENSMUST00000083097 98 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Gm22365-201ENSMUST00000093750 117 ntBASIC3.1□□□□□ -1.91
ClpbQ60649 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ClpbQ60649 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms