Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm26396-201ENSMUST00000104093 132 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm13343-201ENSMUST00000116474 105 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm7974-201ENSMUST00000117154 408 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm6025-201ENSMUST00000121517 201 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm14333-201ENSMUST00000130484 264 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm22099-201ENSMUST00000157925 123 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21756-201ENSMUST00000178380 930 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm24019-201ENSMUST00000178620 107 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21405-201ENSMUST00000179024 930 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm26243-201ENSMUST00000179260 107 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21241-201ENSMUST00000179551 934 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm27878-201ENSMUST00000184000 106 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21191-201ENSMUST00000186484 930 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm29503-201ENSMUST00000191044 930 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm20819-201ENSMUST00000191091 925 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm20871-201ENSMUST00000191322 931 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm38053-201ENSMUST00000193938 160 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm29950-201ENSMUST00000195273 237 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm42739-201ENSMUST00000200687 226 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm44524-201ENSMUST00000203899 271 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm45438-201ENSMUST00000210242 564 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm46193-201ENSMUST00000219399 364 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm23296-201ENSMUST00000082555 107 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm24859-201ENSMUST00000082729 107 ntBASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Trav3-1Q5R1I8 Gm43753-201ENSMUST00000196539 3309 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 n-R5s16-201ENSMUST00000104555 119 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm13194-201ENSMUST00000142299 311 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm24075-201ENSMUST00000158175 72 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm24053-201ENSMUST00000158620 105 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm26622-201ENSMUST00000180520 298 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Gm43142-201ENSMUST00000198670 361 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trav3-1Q5R1I8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm381-201ENSMUST00000117443 2037 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Mir673-201ENSMUST00000102361 91 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm24125-201ENSMUST00000104105 137 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm22023-201ENSMUST00000104354 130 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm12550-201ENSMUST00000118478 329 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm14463-201ENSMUST00000121117 498 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm12096-201ENSMUST00000121149 829 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm23668-201ENSMUST00000157465 111 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm23670-201ENSMUST00000157469 119 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm26181-201ENSMUST00000157687 106 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm22485-201ENSMUST00000157990 109 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm25373-201ENSMUST00000158156 115 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm26213-201ENSMUST00000158582 110 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm25026-201ENSMUST00000175017 188 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm22776-201ENSMUST00000178634 94 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm23767-201ENSMUST00000179278 94 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm28466-201ENSMUST00000190678 659 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm45268-201ENSMUST00000210046 370 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 AC155715.1-201ENSMUST00000213575 463 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 AC122924.2-201ENSMUST00000220799 298 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 AC129541.1-201ENSMUST00000226940 523 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm25147-201ENSMUST00000083030 105 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Gm25683-201ENSMUST00000083940 131 ntBASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-1Q5R1I8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm25068-201ENSMUST00000103895 110 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm649-201ENSMUST00000117284 1054 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Gm16431-201ENSMUST00000117454 431 ntBASIC0.85□□□□□ -2.27
Trav3-1Q5R1I8 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms