Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm26384-201ENSMUST00000102183 110 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm22782-201ENSMUST00000104082 132 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm24280-201ENSMUST00000104237 134 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm14785-201ENSMUST00000120185 539 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm14411-201ENSMUST00000121798 914 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm22755-201ENSMUST00000157143 100 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm25460-201ENSMUST00000157954 127 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm8292-201ENSMUST00000162574 396 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Usp28Q5I043 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm27520-201ENSMUST00000184872 81 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm28648-201ENSMUST00000190092 343 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm42665-201ENSMUST00000202100 586 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm44609-201ENSMUST00000207157 460 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm45049-201ENSMUST00000207586 591 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm44555-201ENSMUST00000209008 148 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm23249-201ENSMUST00000083369 161 ntBASIC2.38□□□□□ -2.03
Usp28Q5I043 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Usp28Q5I043 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Usp28Q5I043 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm23744-201ENSMUST00000104231 149 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm12814-201ENSMUST00000117091 846 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm14868-201ENSMUST00000117840 216 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm11384-201ENSMUST00000121376 303 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm22597-201ENSMUST00000157602 80 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm25706-201ENSMUST00000157828 247 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm23619-201ENSMUST00000178411 94 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm25670-201ENSMUST00000178423 107 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm26239-201ENSMUST00000178842 107 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm25474-201ENSMUST00000179052 94 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm22047-201ENSMUST00000179176 94 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm24267-201ENSMUST00000179841 107 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm27753-201ENSMUST00000184742 203 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm28647-201ENSMUST00000188416 197 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm42475-201ENSMUST00000201212 295 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm18414-201ENSMUST00000210858 694 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Usp28Q5I043 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Usp28Q5I043 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm24292-201ENSMUST00000082888 107 ntBASIC2.37□□□□□ -2.03
Usp28Q5I043 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Usp28Q5I043 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Usp28Q5I043 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm12748-201ENSMUST00000120763 504 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm13424-201ENSMUST00000122301 354 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm11358-201ENSMUST00000122310 373 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm25784-201ENSMUST00000122524 81 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm25294-201ENSMUST00000122791 104 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm24010-201ENSMUST00000157731 282 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm24237-201ENSMUST00000157790 132 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Mir6338-201ENSMUST00000183389 109 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Mir6993-201ENSMUST00000184912 65 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm6060-201ENSMUST00000188671 251 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm19694-201ENSMUST00000192364 505 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm37641-201ENSMUST00000193837 239 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm3442-201ENSMUST00000216808 710 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.36□□□□□ -2.03
Usp28Q5I043 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Usp28Q5I043 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.36□□□□□ -2.03
Usp28Q5I043 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usp28Q5I043 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm12071-201ENSMUST00000121968 469 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm12368-201ENSMUST00000122251 434 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm25052-201ENSMUST00000122661 158 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm22452-201ENSMUST00000122804 104 ntBASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.35□□□□□ -2.03
Usp28Q5I043 Gm16354-201ENSMUST00000155376 150 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms