Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm10343-201ENSMUST00000096279 348 ntBASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim40Q3UWA4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm24889-201ENSMUST00000104388 132 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm15167-201ENSMUST00000121997 187 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm22611-201ENSMUST00000158288 150 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm26406-201ENSMUST00000158503 124 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm25977-201ENSMUST00000158697 85 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm27783-201ENSMUST00000183534 105 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm8747-201ENSMUST00000195392 751 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm37119-201ENSMUST00000195691 389 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm37029-201ENSMUST00000195773 239 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm44142-201ENSMUST00000203358 311 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm43955-201ENSMUST00000204332 142 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm36776-201ENSMUST00000207006 203 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm44824-201ENSMUST00000207021 229 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm45288-201ENSMUST00000210236 151 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Gm18774-201ENSMUST00000218269 601 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim40Q3UWA4 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trim40Q3UWA4 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm381-201ENSMUST00000117443 2037 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm25466-201ENSMUST00000103995 132 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm22590-201ENSMUST00000104247 128 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm11221-201ENSMUST00000117230 597 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm14558-201ENSMUST00000117458 381 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm9071-201ENSMUST00000165915 474 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim40Q3UWA4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm28744-201ENSMUST00000189939 340 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm42622-201ENSMUST00000197229 355 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm44964-201ENSMUST00000207011 273 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm26446-201ENSMUST00000082455 103 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Gm24948-201ENSMUST00000082866 207 ntBASIC2.58□□□□□ -2
Trim40Q3UWA4 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim40Q3UWA4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim40Q3UWA4 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm22831-201ENSMUST00000102473 109 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm11359-201ENSMUST00000120039 567 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm7916-201ENSMUST00000120325 456 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm14638-201ENSMUST00000121338 216 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm22560-201ENSMUST00000157332 120 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm25220-201ENSMUST00000157546 95 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm24436-201ENSMUST00000157889 302 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.57□□□□□ -2
Trim40Q3UWA4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm24086-201ENSMUST00000175171 98 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm28779-201ENSMUST00000189678 323 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm45395-201ENSMUST00000209891 559 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm7692-201ENSMUST00000213534 409 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.57□□□□□ -2
Trim40Q3UWA4 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm23723-201ENSMUST00000082996 132 ntBASIC2.57□□□□□ -2
Trim40Q3UWA4 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Trim40Q3UWA4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm14897-201ENSMUST00000118213 207 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm14843-201ENSMUST00000119596 212 ntBASIC2.56□□□□□ -2
Trim40Q3UWA4 Gm15272-201ENSMUST00000120865 233 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms