Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm22572-201ENSMUST00000082985 105 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 Gm22229-201ENSMUST00000082987 108 ntBASIC2.53□□□□□ -2
Trafd1Q3UDK1 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trafd1Q3UDK1 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm12697-201ENSMUST00000118008 667 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm14333-201ENSMUST00000130484 264 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm16218-201ENSMUST00000155424 388 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm25637-201ENSMUST00000157529 107 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm24498-201ENSMUST00000158445 102 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm25163-201ENSMUST00000158905 104 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Mir7068-201ENSMUST00000183439 74 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm43669-201ENSMUST00000198229 436 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm19147-201ENSMUST00000199622 652 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm29848-201ENSMUST00000203107 295 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm43991-201ENSMUST00000203751 274 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm4921-201ENSMUST00000219804 992 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trafd1Q3UDK1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm22782-201ENSMUST00000104082 132 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm13804-201ENSMUST00000119552 172 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm26101-201ENSMUST00000157246 105 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm22841-201ENSMUST00000158443 62 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm24552-201ENSMUST00000158646 103 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm25361-201ENSMUST00000179358 76 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm23963-201ENSMUST00000179603 77 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm11395-201ENSMUST00000181011 499 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Mir7050-201ENSMUST00000184636 60 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm28489-201ENSMUST00000186655 316 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm28404-201ENSMUST00000190242 453 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm29107-201ENSMUST00000190910 347 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm28927-201ENSMUST00000191528 272 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Trbv7-201ENSMUST00000193339 402 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm37353-201ENSMUST00000194497 313 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm43708-201ENSMUST00000198857 961 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm38395-201ENSMUST00000199904 830 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm2676-201ENSMUST00000207279 606 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm45879-201ENSMUST00000212521 392 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm8125-201ENSMUST00000216602 738 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm2436-201ENSMUST00000219562 774 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trafd1Q3UDK1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm12878-201ENSMUST00000118744 332 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm15443-201ENSMUST00000118947 820 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm14049-201ENSMUST00000121009 636 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm8880-201ENSMUST00000121800 454 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm23981-201ENSMUST00000157136 106 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm24211-201ENSMUST00000158264 107 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm20450-201ENSMUST00000173652 147 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm22853-201ENSMUST00000174974 131 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm24713-201ENSMUST00000178850 107 ntBASIC2.5□□□□□ -2.01
Trafd1Q3UDK1 Gm25448-201ENSMUST00000180065 107 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms