Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm26001-201ENSMUST00000157989 103 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm24216-201ENSMUST00000158259 117 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm24053-201ENSMUST00000158620 105 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm17113-201ENSMUST00000170118 171 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm44519-201ENSMUST00000206486 122 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.99□□□□□ -1.61
Rnf40Q3U319 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm14626-201ENSMUST00000117619 216 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm23586-201ENSMUST00000157657 123 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm24931-201ENSMUST00000158324 107 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm24957-201ENSMUST00000179604 132 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Mir6338-201ENSMUST00000183389 109 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm28500-201ENSMUST00000190286 151 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm28467-201ENSMUST00000190981 318 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm37308-201ENSMUST00000194684 100 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm32308-201ENSMUST00000203053 280 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm45543-201ENSMUST00000209327 88 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm9202-201ENSMUST00000223036 437 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 mt-Tt-201ENSMUST00000082422 67 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Gm22970-201ENSMUST00000083304 186 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rnf40Q3U319 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Rnf40Q3U319 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.98□□□□□ -1.61
Rnf40Q3U319 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm22194-201ENSMUST00000116869 95 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm16186-201ENSMUST00000120132 216 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm25269-201ENSMUST00000122601 104 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm6137-201ENSMUST00000187552 578 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm38332-201ENSMUST00000194189 147 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm45116-201ENSMUST00000207392 275 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm46223-201ENSMUST00000215196 675 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm23303-201ENSMUST00000082714 152 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm26166-201ENSMUST00000083788 107 ntBASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rnf40Q3U319 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Rnf40Q3U319 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Rnf40Q3U319 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Snord90-201ENSMUST00000104568 111 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm13681-201ENSMUST00000117925 210 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm8595-201ENSMUST00000118250 630 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm12423-201ENSMUST00000118334 135 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm12719-201ENSMUST00000118859 241 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm15357-201ENSMUST00000119160 285 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm19503-201ENSMUST00000187109 241 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm43814-201ENSMUST00000197851 413 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm9480-201ENSMUST00000198038 616 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm45393-201ENSMUST00000211634 2631 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm9218-201ENSMUST00000121068 2694 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Rnf40Q3U319 AC153964.2-201ENSMUST00000217704 2474 ntBASIC4.96□□□□□ -1.62
Rnf40Q3U319 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Mir466f-4-201ENSMUST00000116930 121 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm14215-201ENSMUST00000120578 221 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm2182-201ENSMUST00000145243 663 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms