Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm24481-201ENSMUST00000157210 102 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm22889-201ENSMUST00000158639 58 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm23355-201ENSMUST00000177614 107 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm23215-201ENSMUST00000178153 121 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm24264-201ENSMUST00000179835 94 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm23148-201ENSMUST00000180367 107 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm27285-201ENSMUST00000183875 127 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm28849-201ENSMUST00000188127 174 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm28330-201ENSMUST00000190353 171 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm37239-201ENSMUST00000193510 141 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm35702-201ENSMUST00000198653 511 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm24148-201ENSMUST00000082762 80 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm22739-201ENSMUST00000083437 160 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Mir10a-201ENSMUST00000083585 110 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.54□□□□□ -1.84
Col8a1Q00780 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col8a1Q00780 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.54□□□□□ -1.84
Col8a1Q00780 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm22784-201ENSMUST00000104088 132 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm24671-201ENSMUST00000104159 158 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm15896-201ENSMUST00000118045 440 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm14282-201ENSMUST00000119484 240 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm24594-201ENSMUST00000122502 99 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm26148-201ENSMUST00000157430 68 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm24636-201ENSMUST00000158673 288 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm16490-201ENSMUST00000165299 351 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm25121-201ENSMUST00000179846 79 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm37713-201ENSMUST00000191746 198 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm36964-201ENSMUST00000191876 198 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm44324-201ENSMUST00000198517 135 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.53□□□□□ -1.84
Col8a1Q00780 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm25078-201ENSMUST00000082530 107 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm23443-201ENSMUST00000082916 128 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.53□□□□□ -1.84
Col8a1Q00780 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col8a1Q00780 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
Col8a1Q00780 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col8a1Q00780 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm13714-201ENSMUST00000117313 221 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm12571-201ENSMUST00000118132 243 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm7308-201ENSMUST00000121087 447 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm23667-201ENSMUST00000157466 120 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm23219-201ENSMUST00000158123 87 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm22989-201ENSMUST00000158313 86 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm22840-201ENSMUST00000158444 136 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm24006-201ENSMUST00000158462 132 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm16303-201ENSMUST00000161498 390 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm5258-201ENSMUST00000165437 327 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm20542-201ENSMUST00000174582 372 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Mir7014-201ENSMUST00000183853 63 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm27245-201ENSMUST00000184385 376 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm27899-201ENSMUST00000184715 64 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Mir6993-201ENSMUST00000184912 65 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm44389-201ENSMUST00000203795 182 ntBASIC3.52□□□□□ -1.85
Col8a1Q00780 Gm45553-201ENSMUST00000209929 507 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms