Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23148-201ENSMUST00000180367 107 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Mir6537-201ENSMUST00000184150 110 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm27805-201ENSMUST00000184513 79 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm28650-201ENSMUST00000188413 411 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm44010-201ENSMUST00000204432 331 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gm25258-201ENSMUST00000083049 107 ntBASIC4.74□□□□□ -1.65
Rfx1P48377 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rfx1P48377 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rfx1P48377 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rfx1P48377 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Rfx1P48377 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rfx1P48377 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Rfx1P48377 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Rfx1P48377 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Rfx1P48377 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rfx1P48377 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rfx1P48377 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rfx1P48377 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rfx1P48377 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rfx1P48377 Gm12771-201ENSMUST00000120246 135 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.73□□□□□ -1.65
Rfx1P48377 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rfx1P48377 Gm23585-201ENSMUST00000157656 102 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.73□□□□□ -1.65
Rfx1P48377 Gm1833-201ENSMUST00000191608 682 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Gm37713-201ENSMUST00000191746 198 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Gm37763-201ENSMUST00000193445 120 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.73□□□□□ -1.65
Rfx1P48377 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.73□□□□□ -1.65
Rfx1P48377 Gm45879-201ENSMUST00000212521 392 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Mecom-201ENSMUST00000061088 348 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.73□□□□□ -1.65
Rfx1P48377 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rfx1P48377 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rfx1P48377 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rfx1P48377 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Rfx1P48377 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rfx1P48377 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Rfx1P48377 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rfx1P48377 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.72□□□□□ -1.65
Rfx1P48377 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rfx1P48377 Gm12042-201ENSMUST00000120479 301 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rfx1P48377 Mir3104-201ENSMUST00000174911 63 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Gm28000-201ENSMUST00000184380 85 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.72□□□□□ -1.65
Rfx1P48377 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Gm38270-201ENSMUST00000192721 407 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Trbv11-201ENSMUST00000194354 260 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Mir3535-201ENSMUST00000197651 147 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rfx1P48377 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rfx1P48377 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.72□□□□□ -1.65
Rfx1P48377 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Rfx1P48377 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.71□□□□□ -1.65
Rfx1P48377 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Rfx1P48377 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rfx1P48377 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rfx1P48377 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rfx1P48377 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rfx1P48377 Gm11065-201ENSMUST00000111462 228 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm15896-201ENSMUST00000118045 440 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm14881-201ENSMUST00000120366 372 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.71□□□□□ -1.66
Rfx1P48377 Gm23586-201ENSMUST00000157657 123 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm20651-201ENSMUST00000177219 329 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm37746-201ENSMUST00000193249 198 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm37300-201ENSMUST00000193327 280 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm38238-201ENSMUST00000194334 346 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.71□□□□□ -1.66
Rfx1P48377 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.71□□□□□ -1.66
Rfx1P48377 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.71□□□□□ -1.66
Rfx1P48377 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rfx1P48377 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.71□□□□□ -1.66
Rfx1P48377 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Rfx1P48377 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rfx1P48377 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rfx1P48377 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Rfx1P48377 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Rfx1P48377 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rfx1P48377 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rfx1P48377 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rfx1P48377 Gm14518-201ENSMUST00000117351 542 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm11572-201ENSMUST00000119164 120 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm12686-201ENSMUST00000120546 397 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm12466-201ENSMUST00000121199 620 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm12617-201ENSMUST00000121268 381 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm7618-201ENSMUST00000121643 171 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm14768-201ENSMUST00000122126 678 ntBASIC4.7□□□□□ -1.66
Rfx1P48377 Gm16327-201ENSMUST00000137146 228 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms