Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.18□□□□□ -2.06
Sox6P40645 Gm44254-201ENSMUST00000204184 322 ntBASIC2.18□□□□□ -2.06
Sox6P40645 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.18□□□□□ -2.06
Sox6P40645 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.18□□□□□ -2.06
Sox6P40645 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.18□□□□□ -2.06
Sox6P40645 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.18□□□□□ -2.06
Sox6P40645 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.18□□□□□ -2.06
Sox6P40645 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sox6P40645 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Sox6P40645 Gm23448-201ENSMUST00000083151 104 ntBASIC2.18□□□□□ -2.06
Sox6P40645 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
Sox6P40645 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.18□□□□□ -2.06
Sox6P40645 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sox6P40645 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Sox6P40645 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.18□□□□□ -2.06
Sox6P40645 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sox6P40645 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.17□□□□□ -2.06
Sox6P40645 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sox6P40645 Mir1195-201ENSMUST00000116818 98 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm14943-201ENSMUST00000118056 546 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm11357-201ENSMUST00000119758 954 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm24517-201ENSMUST00000122560 107 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
Sox6P40645 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Sox6P40645 Gm22517-201ENSMUST00000158265 136 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm23005-201ENSMUST00000158950 136 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm24137-201ENSMUST00000180055 79 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm22391-201ENSMUST00000180356 79 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm3852-201ENSMUST00000182781 264 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm29604-201ENSMUST00000187176 163 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm42805-201ENSMUST00000196158 276 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.17□□□□□ -2.06
Sox6P40645 Gm43810-201ENSMUST00000201018 232 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.17□□□□□ -2.06
Sox6P40645 Gm46146-201ENSMUST00000217483 346 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sox6P40645 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sox6P40645 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Sox6P40645 Gm24707-201ENSMUST00000082812 107 ntBASIC2.17□□□□□ -2.06
Sox6P40645 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.17□□□□□ -2.06
Sox6P40645 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Sox6P40645 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Sox6P40645 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Sox6P40645 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Sox6P40645 Gm15846-201ENSMUST00000116022 320 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm6587-201ENSMUST00000120219 613 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm23933-201ENSMUST00000178405 79 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sox6P40645 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 Gm28900-201ENSMUST00000185232 156 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.16□□□□□ -2.06
Sox6P40645 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.16□□□□□ -2.06
Sox6P40645 Gm28666-201ENSMUST00000186649 274 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm28163-201ENSMUST00000187099 325 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm37000-201ENSMUST00000193058 428 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm43114-201ENSMUST00000198298 343 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm44161-201ENSMUST00000203532 253 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.16□□□□□ -2.06
Sox6P40645 Gm44961-201ENSMUST00000207450 196 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm44830-201ENSMUST00000207667 584 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm44754-201ENSMUST00000208155 400 ntBASIC2.16□□□□□ -2.06
Sox6P40645 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.16□□□□□ -2.06
Sox6P40645 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.16□□□□□ -2.06
Sox6P40645 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.16□□□□□ -2.06
Sox6P40645 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.16□□□□□ -2.06
Sox6P40645 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sox6P40645 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 Gm24044-201ENSMUST00000083107 156 ntBASIC2.16□□□□□ -2.06
Sox6P40645 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sox6P40645 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sox6P40645 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.15□□□□□ -2.06
Sox6P40645 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Sox6P40645 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.15□□□□□ -2.06
Sox6P40645 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm25088-201ENSMUST00000101803 79 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm24068-201ENSMUST00000104513 132 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Mir190b-201ENSMUST00000104803 80 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm12598-201ENSMUST00000117333 830 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.15□□□□□ -2.07
Sox6P40645 Gm24075-201ENSMUST00000158175 72 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm24769-201ENSMUST00000158506 129 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm22500-201ENSMUST00000158982 99 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Mir3075-201ENSMUST00000175340 85 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.15□□□□□ -2.07
Sox6P40645 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sox6P40645 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sox6P40645 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Sox6P40645 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 142.4 ms