Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Traf1P39428 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm29429-201ENSMUST00000187071 121 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.11□□□□□ -1.91
Traf1P39428 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.11□□□□□ -1.91
Traf1P39428 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.11□□□□□ -1.91
Traf1P39428 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Gm25257-201ENSMUST00000083907 110 ntBASIC3.11□□□□□ -1.91
Traf1P39428 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Traf1P39428 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Traf1P39428 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Traf1P39428 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm12191-201ENSMUST00000118307 348 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm14793-201ENSMUST00000118739 311 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm9703-201ENSMUST00000119573 343 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.1□□□□□ -1.91
Traf1P39428 Gm24439-201ENSMUST00000157894 117 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm9071-201ENSMUST00000165915 474 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm24816-201ENSMUST00000175311 151 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm5224-201ENSMUST00000183060 350 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm27330-201ENSMUST00000184689 132 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm21673-201ENSMUST00000186640 436 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm21135-201ENSMUST00000189023 436 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm43556-201ENSMUST00000196186 681 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm42164-201ENSMUST00000198881 379 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm42578-201ENSMUST00000199960 194 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.1□□□□□ -1.91
Traf1P39428 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.1□□□□□ -1.91
Traf1P39428 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Traf1P39428 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.1□□□□□ -1.91
Traf1P39428 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Mir682-201ENSMUST00000102281 96 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm24126-201ENSMUST00000104111 106 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm25526-201ENSMUST00000104332 132 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Traf1P39428 Gm11845-201ENSMUST00000117886 327 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm11849-201ENSMUST00000121293 261 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.09□□□□□ -1.91
Traf1P39428 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.09□□□□□ -1.91
Traf1P39428 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Traf1P39428 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Traf1P39428 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Traf1P39428 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Traf1P39428 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Traf1P39428 Gm7837-201ENSMUST00000190873 412 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.09□□□□□ -1.91
Traf1P39428 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.09□□□□□ -1.91
Traf1P39428 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.09□□□□□ -1.91
Traf1P39428 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Traf1P39428 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.09□□□□□ -1.91
Traf1P39428 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm22247-201ENSMUST00000082476 131 ntBASIC3.09□□□□□ -1.91
Traf1P39428 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Gm22622-201ENSMUST00000082870 129 ntBASIC3.09□□□□□ -1.91
Traf1P39428 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.08□□□□□ -1.92
Traf1P39428 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.08□□□□□ -1.92
Traf1P39428 Gm43284-201ENSMUST00000200103 253 ntBASIC3.08□□□□□ -1.92
Traf1P39428 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.08□□□□□ -1.92
Traf1P39428 Gm2628-201ENSMUST00000218019 426 ntBASIC3.08□□□□□ -1.92
Traf1P39428 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.08□□□□□ -1.92
Traf1P39428 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Traf1P39428 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Traf1P39428 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Traf1P39428 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Traf1P39428 Gm26247-201ENSMUST00000116702 91 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Mir466k-201ENSMUST00000116774 122 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm3788-201ENSMUST00000119949 136 ntBASIC3.07□□□□□ -1.92
Traf1P39428 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Traf1P39428 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.07□□□□□ -1.92
Traf1P39428 Gm23981-201ENSMUST00000157136 106 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm24922-201ENSMUST00000158511 102 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm25476-201ENSMUST00000175125 185 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm20794-201ENSMUST00000177626 628 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm21744-201ENSMUST00000178403 662 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm21171-201ENSMUST00000180048 673 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm11395-201ENSMUST00000181011 499 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm29413-201ENSMUST00000186019 880 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Traf1P39428 Gm28700-201ENSMUST00000187614 579 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm29639-201ENSMUST00000188375 580 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm28843-201ENSMUST00000189198 678 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm29546-201ENSMUST00000191171 678 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm42647-201ENSMUST00000195939 459 ntBASIC3.07□□□□□ -1.92
Traf1P39428 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Snord104-201ENSMUST00000083192 70 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm23249-201ENSMUST00000083369 161 ntBASIC3.07□□□□□ -1.92
Traf1P39428 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Traf1P39428 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Traf1P39428 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.06□□□□□ -1.92
Traf1P39428 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms