Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm23175-201ENSMUST00000104371 132 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm22486-201ENSMUST00000116815 137 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm14657-201ENSMUST00000117461 302 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm12878-201ENSMUST00000118744 332 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm12156-201ENSMUST00000119188 554 ntBASIC2.56□□□□□ -2
HmgclP38060 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
HmgclP38060 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.56□□□□□ -2
HmgclP38060 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
HmgclP38060 Gm25559-201ENSMUST00000157182 74 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm25283-201ENSMUST00000157272 77 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm24475-201ENSMUST00000157435 143 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm25637-201ENSMUST00000157529 107 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm17162-201ENSMUST00000168538 473 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm24518-201ENSMUST00000180275 94 ntBASIC2.56□□□□□ -2
HmgclP38060 Mir6341-201ENSMUST00000183490 121 ntBASIC2.56□□□□□ -2
HmgclP38060 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HmgclP38060 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HmgclP38060 Gm8041-201ENSMUST00000199755 616 ntBASIC2.56□□□□□ -2
HmgclP38060 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.56□□□□□ -2
HmgclP38060 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.56□□□□□ -2
HmgclP38060 Gm35558-203ENSMUST00000222264 204 ntBASIC2.56□□□□□ -2
HmgclP38060 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.56□□□□□ -2
HmgclP38060 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.56□□□□□ -2
HmgclP38060 Mir193a-201ENSMUST00000083461 66 ntBASIC2.56□□□□□ -2
HmgclP38060 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
HmgclP38060 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HmgclP38060 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.55□□□□□ -2
HmgclP38060 Mir542-201ENSMUST00000102186 85 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm14918-201ENSMUST00000118153 268 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm22755-201ENSMUST00000157143 100 ntBASIC2.55□□□□□ -2
HmgclP38060 Mir5129-201ENSMUST00000174938 78 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm22851-201ENSMUST00000178741 94 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm25074-201ENSMUST00000178782 94 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm27660-201ENSMUST00000184028 208 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm28489-201ENSMUST00000186655 316 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm10193-201ENSMUST00000188288 231 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm29184-201ENSMUST00000190038 334 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm19147-201ENSMUST00000199622 652 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.55□□□□□ -2
HmgclP38060 Gm29848-201ENSMUST00000203107 295 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm32222-201ENSMUST00000203296 298 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm44399-201ENSMUST00000205043 226 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm44903-201ENSMUST00000206840 130 ntBASIC2.55□□□□□ -2
HmgclP38060 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HmgclP38060 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.55□□□□□ -2
HmgclP38060 Gm45678-201ENSMUST00000210509 295 ntBASIC2.55□□□□□ -2
HmgclP38060 Gm45879-201ENSMUST00000212521 392 ntBASIC2.55□□□□□ -2
HmgclP38060 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.55□□□□□ -2
HmgclP38060 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.55□□□□□ -2
HmgclP38060 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.55□□□□□ -2
HmgclP38060 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HmgclP38060 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HmgclP38060 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HmgclP38060 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.54□□□□□ -2
HmgclP38060 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.54□□□□□ -2
HmgclP38060 Mir466k-201ENSMUST00000116774 122 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm14558-201ENSMUST00000117458 381 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm14906-201ENSMUST00000119265 390 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm14392-201ENSMUST00000120332 401 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm16428-201ENSMUST00000121193 723 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm14413-201ENSMUST00000122158 408 ntBASIC2.54□□□□□ -2
HmgclP38060 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm26099-201ENSMUST00000157248 109 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm24784-201ENSMUST00000157640 62 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm23068-201ENSMUST00000158239 293 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm17065-201ENSMUST00000165245 239 ntBASIC2.54□□□□□ -2
HmgclP38060 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm25361-201ENSMUST00000179358 76 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm22631-201ENSMUST00000179656 94 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm27317-201ENSMUST00000183533 95 ntBASIC2.54□□□□□ -2
HmgclP38060 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm9696-202ENSMUST00000191541 830 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm42164-201ENSMUST00000198881 379 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm43991-201ENSMUST00000203751 274 ntBASIC2.54□□□□□ -2
HmgclP38060 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.54□□□□□ -2
HmgclP38060 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.54□□□□□ -2
HmgclP38060 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HmgclP38060 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
HmgclP38060 Gm23650-201ENSMUST00000083355 70 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm4017-201ENSMUST00000084813 338 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm5670-201ENSMUST00000093546 372 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.54□□□□□ -2
HmgclP38060 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.54□□□□□ -2
HmgclP38060 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HmgclP38060 Gm15106-201ENSMUST00000119691 821 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm5958-201ENSMUST00000147698 297 ntBASIC2.53□□□□□ -2
HmgclP38060 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.53□□□□□ -2
HmgclP38060 Gm23600-201ENSMUST00000157260 71 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm26041-201ENSMUST00000158148 108 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm16232-201ENSMUST00000162856 167 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm8207-201ENSMUST00000171204 502 ntBASIC2.53□□□□□ -2
HmgclP38060 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HmgclP38060 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm20718-201ENSMUST00000176058 259 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm21758-201ENSMUST00000179336 819 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm20832-201ENSMUST00000189076 665 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm28241-201ENSMUST00000190916 235 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm37658-201ENSMUST00000192672 315 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm38311-201ENSMUST00000192945 165 ntBASIC2.53□□□□□ -2
HmgclP38060 Gm31511-201ENSMUST00000193134 657 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 176 ms