Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LdlrP35951 Gm45162-201ENSMUST00000209013 618 ntBASIC3.66□□□□□ -1.82
LdlrP35951 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.66□□□□□ -1.82
LdlrP35951 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.66□□□□□ -1.82
LdlrP35951 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.66□□□□□ -1.82
LdlrP35951 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LdlrP35951 Gm24316-201ENSMUST00000083041 107 ntBASIC3.66□□□□□ -1.82
LdlrP35951 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LdlrP35951 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LdlrP35951 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LdlrP35951 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LdlrP35951 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
LdlrP35951 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LdlrP35951 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LdlrP35951 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LdlrP35951 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LdlrP35951 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.65□□□□□ -1.82
LdlrP35951 Gm23142-201ENSMUST00000101848 105 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm26240-201ENSMUST00000101893 105 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LdlrP35951 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm23578-201ENSMUST00000103943 104 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LdlrP35951 Gm12647-201ENSMUST00000118977 265 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm14940-201ENSMUST00000119309 495 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm13557-201ENSMUST00000120771 382 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm23168-201ENSMUST00000157156 143 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm25977-201ENSMUST00000158697 85 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm37239-201ENSMUST00000193510 141 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm38060-201ENSMUST00000194822 464 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm43284-201ENSMUST00000200103 253 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm7041-201ENSMUST00000201227 524 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.65□□□□□ -1.83
LdlrP35951 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm3829-201ENSMUST00000222362 619 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LdlrP35951 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
LdlrP35951 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LdlrP35951 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LdlrP35951 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.65□□□□□ -1.83
LdlrP35951 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.65□□□□□ -1.83
LdlrP35951 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LdlrP35951 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LdlrP35951 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LdlrP35951 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LdlrP35951 Gm24376-201ENSMUST00000104399 127 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm14627-201ENSMUST00000118931 567 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm12155-201ENSMUST00000121267 160 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.64□□□□□ -1.83
LdlrP35951 Gm25621-201ENSMUST00000157223 114 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm23084-201ENSMUST00000157850 114 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm26001-201ENSMUST00000157989 103 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm26041-201ENSMUST00000158148 108 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm23759-201ENSMUST00000158351 268 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm25486-201ENSMUST00000158726 63 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm6374-201ENSMUST00000159051 788 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LdlrP35951 Gm6947-201ENSMUST00000186254 78 ntBASIC3.64□□□□□ -1.83
LdlrP35951 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.64□□□□□ -1.83
LdlrP35951 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.64□□□□□ -1.83
LdlrP35951 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm45403-201ENSMUST00000209453 276 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm45245-201ENSMUST00000210082 376 ntBASIC3.64□□□□□ -1.83
LdlrP35951 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.64□□□□□ -1.83
LdlrP35951 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.64□□□□□ -1.83
LdlrP35951 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.64□□□□□ -1.83
LdlrP35951 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LdlrP35951 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LdlrP35951 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LdlrP35951 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LdlrP35951 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LdlrP35951 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LdlrP35951 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LdlrP35951 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
LdlrP35951 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LdlrP35951 Gm22497-201ENSMUST00000104499 131 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm13903-201ENSMUST00000120945 193 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm5123-201ENSMUST00000121905 837 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm5755-201ENSMUST00000152394 837 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm23557-201ENSMUST00000157820 138 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm24584-201ENSMUST00000157972 107 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm22889-201ENSMUST00000158639 58 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm25369-201ENSMUST00000158848 132 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.63□□□□□ -1.83
LdlrP35951 Gm24085-201ENSMUST00000175172 116 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm25749-201ENSMUST00000175485 111 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm20630-201ENSMUST00000177387 551 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm22286-201ENSMUST00000179708 107 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm27189-201ENSMUST00000184119 190 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm28534-201ENSMUST00000187744 676 ntBASIC3.63□□□□□ -1.83
LdlrP35951 Gm28314-201ENSMUST00000191276 345 ntBASIC3.63□□□□□ -1.83
LdlrP35951 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms