Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RaraP11416 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
RaraP11416 Gm11065-201ENSMUST00000111462 228 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm25914-201ENSMUST00000157618 153 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm26085-201ENSMUST00000157900 116 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm22314-201ENSMUST00000158007 281 ntBASIC4.47□□□□□ -1.69
RaraP11416 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.47□□□□□ -1.69
RaraP11416 Mir6933-201ENSMUST00000184982 81 ntBASIC4.47□□□□□ -1.69
RaraP11416 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm44349-201ENSMUST00000197048 123 ntBASIC4.47□□□□□ -1.69
RaraP11416 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.47□□□□□ -1.69
RaraP11416 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm26449-201ENSMUST00000082452 104 ntBASIC4.47□□□□□ -1.69
RaraP11416 Gm23517-201ENSMUST00000082830 192 ntBASIC4.47□□□□□ -1.69
RaraP11416 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RaraP11416 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RaraP11416 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RaraP11416 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RaraP11416 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RaraP11416 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.47□□□□□ -1.69
RaraP11416 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RaraP11416 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.47□□□□□ -1.69
RaraP11416 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
RaraP11416 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RaraP11416 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RaraP11416 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RaraP11416 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.46□□□□□ -1.7
RaraP11416 Snord19-201ENSMUST00000104609 76 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm24605-201ENSMUST00000104772 96 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm12617-201ENSMUST00000121268 381 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.46□□□□□ -1.7
RaraP11416 Gm23171-201ENSMUST00000157159 264 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm26045-201ENSMUST00000157862 97 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm25456-201ENSMUST00000157952 109 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm27470-201ENSMUST00000184070 210 ntBASIC4.46□□□□□ -1.7
RaraP11416 Mir6410-201ENSMUST00000184204 104 ntBASIC4.46□□□□□ -1.7
RaraP11416 Mir6418-201ENSMUST00000185075 115 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm43749-201ENSMUST00000199345 352 ntBASIC4.46□□□□□ -1.7
RaraP11416 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.46□□□□□ -1.7
RaraP11416 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.46□□□□□ -1.7
RaraP11416 Gm44259-201ENSMUST00000204996 298 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.46□□□□□ -1.7
RaraP11416 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm7422-201ENSMUST00000220115 640 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.46□□□□□ -1.7
RaraP11416 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RaraP11416 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RaraP11416 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm23042-201ENSMUST00000083866 101 ntBASIC4.46□□□□□ -1.7
RaraP11416 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RaraP11416 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RaraP11416 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RaraP11416 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RaraP11416 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.45□□□□□ -1.7
RaraP11416 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.45□□□□□ -1.7
RaraP11416 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RaraP11416 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
RaraP11416 Gm24987-201ENSMUST00000104453 134 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Gm12261-201ENSMUST00000117499 645 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm8666-201ENSMUST00000117517 292 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm11281-201ENSMUST00000141391 576 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm25908-201ENSMUST00000157624 98 ntBASIC4.45□□□□□ -1.7
RaraP11416 Mir1947-201ENSMUST00000158235 85 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm2389-201ENSMUST00000160487 189 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm29428-201ENSMUST00000190086 409 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm18213-201ENSMUST00000207850 178 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.45□□□□□ -1.7
RaraP11416 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm18188-201ENSMUST00000219386 478 ntBASIC4.45□□□□□ -1.7
RaraP11416 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RaraP11416 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.45□□□□□ -1.7
RaraP11416 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.45□□□□□ -1.7
RaraP11416 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.44□□□□□ -1.7
RaraP11416 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RaraP11416 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RaraP11416 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 Gm23990-201ENSMUST00000117031 117 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm13504-201ENSMUST00000117490 316 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm22027-201ENSMUST00000122737 127 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.44□□□□□ -1.7
RaraP11416 Gm22321-201ENSMUST00000157152 104 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm24720-201ENSMUST00000157518 166 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm25665-201ENSMUST00000157695 110 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm27564-201ENSMUST00000185196 96 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.44□□□□□ -1.7
RaraP11416 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC4.44□□□□□ -1.7
RaraP11416 Gm43978-201ENSMUST00000203491 451 ntBASIC4.44□□□□□ -1.7
RaraP11416 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm44030-201ENSMUST00000204865 432 ntBASIC4.44□□□□□ -1.7
RaraP11416 Gm5002-201ENSMUST00000207145 223 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 133.7 ms