Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Snord14d-201ENSMUST00000083424 86 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Mir99a-201ENSMUST00000083596 65 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.79□□□□□ -1.8
Hoxd3P09027 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd3P09027 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd3P09027 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm22272-201ENSMUST00000104039 134 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm22899-201ENSMUST00000104540 131 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm9157-201ENSMUST00000117673 225 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm23964-201ENSMUST00000157966 107 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm24931-201ENSMUST00000158324 107 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm22075-201ENSMUST00000158599 192 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm22326-201ENSMUST00000158897 351 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm17113-201ENSMUST00000170118 171 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm25534-201ENSMUST00000175365 125 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm17067-202ENSMUST00000180131 123 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm7449-201ENSMUST00000194393 663 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm9251-201ENSMUST00000197202 628 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm43199-201ENSMUST00000200019 307 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm42844-201ENSMUST00000200355 112 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd3P09027 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm24453-201ENSMUST00000083346 76 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd3P09027 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm45129-201ENSMUST00000208444 2224 ntBASIC3.78□□□□□ -1.8
Hoxd3P09027 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd3P09027 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd3P09027 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd3P09027 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm12423-201ENSMUST00000118334 135 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm15772-201ENSMUST00000118533 438 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm14593-201ENSMUST00000119948 294 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm22477-201ENSMUST00000122569 316 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm22561-201ENSMUST00000157331 84 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm2389-201ENSMUST00000160487 189 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Mir6344-201ENSMUST00000183462 104 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm27271-201ENSMUST00000183509 170 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Mir6383-201ENSMUST00000184545 116 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm28097-201ENSMUST00000187333 366 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm37030-201ENSMUST00000194254 295 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm37659-201ENSMUST00000194574 111 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm44352-201ENSMUST00000196358 110 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Gm17887-201ENSMUST00000200194 547 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.77□□□□□ -1.81
Hoxd3P09027 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Hoxd3P09027 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hoxd3P09027 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm24831-201ENSMUST00000116778 126 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm24650-201ENSMUST00000157105 103 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm23434-201ENSMUST00000157179 100 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm24949-201ENSMUST00000183609 215 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.76□□□□□ -1.81
Hoxd3P09027 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm5010-201ENSMUST00000213131 260 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm46138-201ENSMUST00000215294 426 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm22509-201ENSMUST00000082775 107 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm22970-201ENSMUST00000083304 186 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm25409-201ENSMUST00000083764 131 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm22826-201ENSMUST00000083774 165 ntBASIC3.76□□□□□ -1.81
Hoxd3P09027 Gm23847-201ENSMUST00000083829 110 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms