Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col3a1P08121 Gm21978-201ENSMUST00000179696 377 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm29231-201ENSMUST00000179850 319 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col3a1P08121 Gm24415-201ENSMUST00000180218 107 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Mir7009-201ENSMUST00000184519 64 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm28146-201ENSMUST00000185517 701 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm44385-201ENSMUST00000198781 81 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Mir466e-201ENSMUST00000198862 84 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm44519-201ENSMUST00000206486 122 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm45049-201ENSMUST00000207586 591 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm18703-201ENSMUST00000215318 333 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.23□□□□□ -1.89
Col3a1P08121 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Col3a1P08121 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col3a1P08121 Gm4017-201ENSMUST00000084813 338 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col3a1P08121 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col3a1P08121 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.23□□□□□ -1.89
Col3a1P08121 Gm14558-201ENSMUST00000117458 381 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.22□□□□□ -1.89
Col3a1P08121 Gm25706-201ENSMUST00000157828 247 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm29134-201ENSMUST00000186579 126 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm28241-201ENSMUST00000190916 235 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm38008-201ENSMUST00000195333 518 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Mir142-201ENSMUST00000198092 64 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm44817-201ENSMUST00000205416 453 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm45508-201ENSMUST00000209298 299 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm6796-201ENSMUST00000211919 243 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm24928-201ENSMUST00000083399 107 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm23096-201ENSMUST00000083447 107 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm25897-201ENSMUST00000083709 107 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col3a1P08121 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col3a1P08121 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col3a1P08121 Gm11784-201ENSMUST00000118568 474 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm22563-201ENSMUST00000157333 269 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm22336-201ENSMUST00000157719 107 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm25184-201ENSMUST00000157753 163 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm22099-201ENSMUST00000157925 123 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm23409-201ENSMUST00000158516 237 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm16038-201ENSMUST00000159317 193 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm15900-201ENSMUST00000161584 342 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col3a1P08121 Mir3075-201ENSMUST00000175340 85 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col3a1P08121 Gm8532-201ENSMUST00000179174 461 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm27803-201ENSMUST00000183763 119 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm28951-201ENSMUST00000190742 313 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm43704-201ENSMUST00000196164 496 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm42526-201ENSMUST00000198956 393 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm44161-201ENSMUST00000203532 253 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm44844-201ENSMUST00000207242 336 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Gm24764-201ENSMUST00000083686 199 ntBASIC3.22□□□□□ -1.89
Col3a1P08121 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col3a1P08121 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col3a1P08121 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col3a1P08121 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm22021-201ENSMUST00000104353 107 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm13804-201ENSMUST00000119552 172 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm24419-201ENSMUST00000157875 332 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm22330-201ENSMUST00000158068 115 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm25863-201ENSMUST00000158249 329 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm3030-201ENSMUST00000163410 516 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm22584-201ENSMUST00000177935 92 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm25314-201ENSMUST00000178810 79 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm24306-201ENSMUST00000180229 79 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm23648-201ENSMUST00000180301 107 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm37455-201ENSMUST00000191993 529 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm43043-201ENSMUST00000196579 412 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm43083-201ENSMUST00000199594 476 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm26379-202ENSMUST00000200225 132 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm43925-201ENSMUST00000203498 206 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.21□□□□□ -1.9
Col3a1P08121 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Gm23506-201ENSMUST00000083077 107 ntBASIC3.21□□□□□ -1.9
Col3a1P08121 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col3a1P08121 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.2□□□□□ -1.9
Col3a1P08121 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms