Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Best1O88870 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Best1O88870 Gm24119-201ENSMUST00000103979 246 ntBASIC3.59□□□□□ -1.83
Best1O88870 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Best1O88870 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Best1O88870 Gm13153-201ENSMUST00000120969 637 ntBASIC3.59□□□□□ -1.83
Best1O88870 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm26256-201ENSMUST00000122499 186 ntBASIC3.59□□□□□ -1.83
Best1O88870 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.59□□□□□ -1.83
Best1O88870 Gm23231-201ENSMUST00000157299 104 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm16303-201ENSMUST00000161498 390 ntBASIC3.59□□□□□ -1.83
Best1O88870 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.59□□□□□ -1.83
Best1O88870 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.59□□□□□ -1.83
Best1O88870 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm19637-201ENSMUST00000185933 579 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28838-201ENSMUST00000186338 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm29635-201ENSMUST00000187221 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm29026-201ENSMUST00000187787 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28661-201ENSMUST00000188231 681 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28797-201ENSMUST00000188543 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28855-201ENSMUST00000188680 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28705-201ENSMUST00000189548 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28939-201ENSMUST00000190351 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm28223-201ENSMUST00000190469 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm29092-201ENSMUST00000190768 315 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm37128-201ENSMUST00000192599 232 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm37698-201ENSMUST00000192605 463 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.59□□□□□ -1.83
Best1O88870 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Best1O88870 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.59□□□□□ -1.83
Best1O88870 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.59□□□□□ -1.83
Best1O88870 Gm23736-201ENSMUST00000082553 75 ntBASIC3.59□□□□□ -1.83
Best1O88870 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.59□□□□□ -1.83
Best1O88870 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Best1O88870 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Best1O88870 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Best1O88870 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.58□□□□□ -1.84
Best1O88870 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Best1O88870 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Best1O88870 Gm23987-201ENSMUST00000117039 129 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm16005-201ENSMUST00000120515 269 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.58□□□□□ -1.84
Best1O88870 Gm22310-201ENSMUST00000157509 116 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm24857-201ENSMUST00000158061 310 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm17919-201ENSMUST00000173344 312 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm27903-201ENSMUST00000175482 126 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm27582-201ENSMUST00000184084 126 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.58□□□□□ -1.84
Best1O88870 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.58□□□□□ -1.84
Best1O88870 Gm45704-201ENSMUST00000212582 403 ntBASIC3.58□□□□□ -1.84
Best1O88870 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.58□□□□□ -1.84
Best1O88870 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Best1O88870 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.58□□□□□ -1.84
Best1O88870 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.58□□□□□ -1.84
Best1O88870 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.58□□□□□ -1.84
Best1O88870 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.58□□□□□ -1.84
Best1O88870 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Best1O88870 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.58□□□□□ -1.84
Best1O88870 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 Gm22270-201ENSMUST00000104034 132 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm14073-201ENSMUST00000117344 381 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm11923-201ENSMUST00000118135 508 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm13409-201ENSMUST00000122072 546 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm23123-201ENSMUST00000157648 144 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm24727-201ENSMUST00000158231 144 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm17187-201ENSMUST00000164622 410 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm20399-201ENSMUST00000174652 132 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm28010-201ENSMUST00000179485 126 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm27470-201ENSMUST00000184070 210 ntBASIC3.57□□□□□ -1.84
Best1O88870 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 Gm37361-201ENSMUST00000194345 132 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm34015-201ENSMUST00000194908 451 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Best1O88870 Gm45315-201ENSMUST00000209283 333 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm45245-201ENSMUST00000210082 376 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm9712-201ENSMUST00000210842 311 ntBASIC3.57□□□□□ -1.84
Best1O88870 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.57□□□□□ -1.84
Best1O88870 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 Gm2436-201ENSMUST00000219562 774 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm33654-201ENSMUST00000221704 215 ntBASIC3.57□□□□□ -1.84
Best1O88870 Gm21937-201ENSMUST00000222825 218 ntBASIC3.57□□□□□ -1.84
Best1O88870 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Best1O88870 Gm10212-201ENSMUST00000087884 324 ntBASIC3.57□□□□□ -1.84
Best1O88870 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Best1O88870 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.57□□□□□ -1.84
Best1O88870 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Best1O88870 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Best1O88870 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.56□□□□□ -1.84
Best1O88870 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.56□□□□□ -1.84
Best1O88870 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Best1O88870 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.56□□□□□ -1.84
Best1O88870 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms