Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
DffaO54786 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm12706-201ENSMUST00000121588 698 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.51□□□□□ -2.17
DffaO54786 Gm24854-201ENSMUST00000158025 98 ntBASIC1.51□□□□□ -2.17
DffaO54786 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DffaO54786 Gm20794-201ENSMUST00000177626 628 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.51□□□□□ -2.17
DffaO54786 Gm27493-201ENSMUST00000184128 78 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm20058-201ENSMUST00000186939 284 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm28356-202ENSMUST00000187566 858 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm20885-201ENSMUST00000190192 654 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm33571-201ENSMUST00000193271 657 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm36866-201ENSMUST00000193343 657 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm36047-201ENSMUST00000193659 657 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm20857-201ENSMUST00000194766 657 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm7871-201ENSMUST00000195346 618 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm20858-201ENSMUST00000195459 657 ntBASIC1.51□□□□□ -2.17
DffaO54786 Gm30638-201ENSMUST00000195570 656 ntBASIC1.51□□□□□ -2.17
DffaO54786 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.51□□□□□ -2.17
DffaO54786 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DffaO54786 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
DffaO54786 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DffaO54786 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.5□□□□□ -2.17
DffaO54786 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
DffaO54786 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
DffaO54786 Gm14868-201ENSMUST00000117840 216 ntBASIC1.5□□□□□ -2.17
DffaO54786 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.5□□□□□ -2.17
DffaO54786 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
DffaO54786 Gm17113-201ENSMUST00000170118 171 ntBASIC1.5□□□□□ -2.17
DffaO54786 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC1.5□□□□□ -2.17
DffaO54786 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.5□□□□□ -2.17
DffaO54786 Gm42924-201ENSMUST00000197261 185 ntBASIC1.5□□□□□ -2.17
DffaO54786 Gm43427-201ENSMUST00000198188 331 ntBASIC1.5□□□□□ -2.17
DffaO54786 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
DffaO54786 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DffaO54786 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.5□□□□□ -2.17
DffaO54786 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
DffaO54786 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
DffaO54786 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
DffaO54786 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.49□□□□□ -2.17
DffaO54786 Gm14918-201ENSMUST00000118153 268 ntBASIC1.49□□□□□ -2.17
DffaO54786 Gm3788-201ENSMUST00000119949 136 ntBASIC1.49□□□□□ -2.17
DffaO54786 Gm14815-201ENSMUST00000120060 488 ntBASIC1.49□□□□□ -2.17
DffaO54786 Gm24592-201ENSMUST00000122505 106 ntBASIC1.49□□□□□ -2.17
DffaO54786 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.49□□□□□ -2.17
DffaO54786 Gm22963-201ENSMUST00000157960 91 ntBASIC1.49□□□□□ -2.17
DffaO54786 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.49□□□□□ -2.17
DffaO54786 Gm25958-201ENSMUST00000175114 71 ntBASIC1.49□□□□□ -2.17
DffaO54786 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.49□□□□□ -2.17
DffaO54786 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.49□□□□□ -2.17
DffaO54786 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.49□□□□□ -2.17
DffaO54786 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
DffaO54786 Gm26206-201ENSMUST00000082908 110 ntBASIC1.49□□□□□ -2.17
DffaO54786 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.49□□□□□ -2.17
DffaO54786 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
DffaO54786 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm25992-201ENSMUST00000102437 109 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm13331-201ENSMUST00000117500 448 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm14823-201ENSMUST00000117698 238 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm13355-201ENSMUST00000117996 317 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm13510-201ENSMUST00000118659 429 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm12351-201ENSMUST00000118727 292 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm11363-201ENSMUST00000121672 548 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm25831-201ENSMUST00000158924 163 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
DffaO54786 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
DffaO54786 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.48□□□□□ -2.17
DffaO54786 Gm37162-201ENSMUST00000191708 551 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm37946-201ENSMUST00000192064 347 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm44585-201ENSMUST00000207150 607 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm18991-201ENSMUST00000209225 746 ntBASIC1.48□□□□□ -2.17
DffaO54786 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm29809-201ENSMUST00000218423 493 ntBASIC1.48□□□□□ -2.17
DffaO54786 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.48□□□□□ -2.17
DffaO54786 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
DffaO54786 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.48□□□□□ -2.17
DffaO54786 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
DffaO54786 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
DffaO54786 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
DffaO54786 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
DffaO54786 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
DffaO54786 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
DffaO54786 Gm9432-201ENSMUST00000117810 759 ntBASIC1.47□□□□□ -2.17
DffaO54786 Gm14899-201ENSMUST00000118673 548 ntBASIC1.47□□□□□ -2.17
DffaO54786 Gm13359-201ENSMUST00000119000 695 ntBASIC1.47□□□□□ -2.17
DffaO54786 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.47□□□□□ -2.17
DffaO54786 Gm22960-201ENSMUST00000122517 104 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms