Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm22960-201ENSMUST00000122517 104 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.53□□□□□ -2.16
Sdc4O35988 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.53□□□□□ -2.16
Sdc4O35988 Gm22755-201ENSMUST00000157143 100 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm23958-201ENSMUST00000157207 105 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm23559-201ENSMUST00000157824 103 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm18415-201ENSMUST00000177464 647 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm27522-201ENSMUST00000183949 230 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm28058-201ENSMUST00000186421 264 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm43043-201ENSMUST00000196579 412 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Gm17937-201ENSMUST00000197908 742 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.53□□□□□ -2.16
Sdc4O35988 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Sdc4O35988 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Sdc4O35988 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.52□□□□□ -2.17
Sdc4O35988 Gm15526-201ENSMUST00000112504 204 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Gm26101-201ENSMUST00000157246 105 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Mir6371-201ENSMUST00000184470 111 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Gm43142-201ENSMUST00000198670 361 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC1.52□□□□□ -2.17
Sdc4O35988 Gm45614-201ENSMUST00000209994 721 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Gm19885-201ENSMUST00000212853 343 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.52□□□□□ -2.17
Sdc4O35988 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.52□□□□□ -2.17
Sdc4O35988 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.52□□□□□ -2.17
Sdc4O35988 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Sdc4O35988 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Sdc4O35988 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Sdc4O35988 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm12814-201ENSMUST00000117091 846 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm11268-201ENSMUST00000118347 267 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm12351-201ENSMUST00000118727 292 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.51□□□□□ -2.17
Sdc4O35988 Gm25961-201ENSMUST00000157174 135 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm23718-201ENSMUST00000157350 307 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm23122-201ENSMUST00000157645 103 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm23704-201ENSMUST00000158844 340 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm23267-201ENSMUST00000178490 132 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Sdc4O35988 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Sdc4O35988 Gm26960-201ENSMUST00000182263 412 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm32175-201ENSMUST00000193641 346 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm37576-201ENSMUST00000194228 372 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC1.51□□□□□ -2.17
Sdc4O35988 Mir137-201ENSMUST00000083635 73 ntBASIC1.51□□□□□ -2.17
Sdc4O35988 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm16431-201ENSMUST00000117454 431 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm11854-201ENSMUST00000117839 446 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm15113-201ENSMUST00000119280 836 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm12591-201ENSMUST00000122407 1177 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
Sdc4O35988 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Mir7241-201ENSMUST00000184532 64 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.5□□□□□ -2.17
Sdc4O35988 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.5□□□□□ -2.17
Sdc4O35988 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm25820-201ENSMUST00000198589 127 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Sdc4O35988 Gm45365-201ENSMUST00000209489 256 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm45386-201ENSMUST00000210194 218 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Gm23247-201ENSMUST00000083373 107 ntBASIC1.5□□□□□ -2.17
Sdc4O35988 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Sdc4O35988 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Gm12512-201ENSMUST00000119620 217 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.49□□□□□ -2.17
Sdc4O35988 Gm26049-201ENSMUST00000157313 108 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Gm19147-201ENSMUST00000199622 652 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.49□□□□□ -2.17
Sdc4O35988 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.49□□□□□ -2.17
Sdc4O35988 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Sdc4O35988 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Sdc4O35988 Gm24928-201ENSMUST00000083399 107 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Gm25897-201ENSMUST00000083709 107 ntBASIC1.49□□□□□ -2.17
Sdc4O35988 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Sdc4O35988 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.48□□□□□ -2.17
Sdc4O35988 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms