Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nedd9O35177 Gm29452-201ENSMUST00000187996 313 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.81□□□□□ -1.8
Nedd9O35177 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Gm37029-201ENSMUST00000195773 239 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Gm43739-201ENSMUST00000198294 307 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Nedd9O35177 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nedd9O35177 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nedd9O35177 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nedd9O35177 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nedd9O35177 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nedd9O35177 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.81□□□□□ -1.8
Nedd9O35177 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Nedd9O35177 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nedd9O35177 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nedd9O35177 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Gm23256-201ENSMUST00000102235 110 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm26140-201ENSMUST00000103807 110 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm22590-201ENSMUST00000104247 128 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm22496-201ENSMUST00000104493 88 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm13122-201ENSMUST00000118380 453 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm12876-201ENSMUST00000120975 408 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm23887-201ENSMUST00000122683 172 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm22098-201ENSMUST00000157930 85 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm23581-201ENSMUST00000158531 63 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm22908-201ENSMUST00000177620 110 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm26426-201ENSMUST00000177866 123 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm25175-201ENSMUST00000178712 79 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm26060-201ENSMUST00000180094 123 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm7909-201ENSMUST00000182688 614 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm27308-201ENSMUST00000184807 233 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nedd9O35177 Gm28155-201ENSMUST00000191066 151 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm37104-201ENSMUST00000193278 196 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.8□□□□□ -1.8
Nedd9O35177 Gm45616-201ENSMUST00000211711 319 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 AC154552.1-201ENSMUST00000222969 202 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm2710-201ENSMUST00000073196 603 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nedd9O35177 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nedd9O35177 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nedd9O35177 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.8□□□□□ -1.8
Nedd9O35177 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nedd9O35177 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nedd9O35177 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nedd9O35177 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Nedd9O35177 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm6274-201ENSMUST00000118173 797 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm11785-201ENSMUST00000120165 601 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm16005-201ENSMUST00000120515 269 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm11384-201ENSMUST00000121376 303 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm23168-201ENSMUST00000157156 143 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm25967-201ENSMUST00000157168 147 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm23755-201ENSMUST00000157578 343 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm25184-201ENSMUST00000157753 163 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm26400-201ENSMUST00000175012 85 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm26501-201ENSMUST00000178307 107 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.79□□□□□ -1.8
Nedd9O35177 Mir8106-201ENSMUST00000184520 139 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm7837-201ENSMUST00000190873 412 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm28314-201ENSMUST00000191276 345 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm19202-201ENSMUST00000198096 808 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm43914-201ENSMUST00000203592 594 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm44266-201ENSMUST00000205235 500 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm45395-201ENSMUST00000209891 559 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Gm7948-201ENSMUST00000212607 844 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nedd9O35177 Mir21a-201ENSMUST00000083521 92 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Snord15a-201ENSMUST00000083888 148 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.79□□□□□ -1.8
Nedd9O35177 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nedd9O35177 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms