Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm18384-201ENSMUST00000195974 808 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm44519-201ENSMUST00000206486 122 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 AC140254.1-201ENSMUST00000220063 331 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 CR974429.1-201ENSMUST00000220877 827 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 AC165092.3-201ENSMUST00000223602 282 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 AC155167.3-201ENSMUST00000226349 217 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 AC113031.4-201ENSMUST00000228381 514 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Mecom-201ENSMUST00000061088 348 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Trim55G3X8Y1 Snora23-201ENSMUST00000082517 184 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Trim55G3X8Y1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim55G3X8Y1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Trim55G3X8Y1 Gm37011-201ENSMUST00000195543 2935 ntBASIC4□□□□□ -1.77
Trim55G3X8Y1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm13378-201ENSMUST00000117483 336 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm14628-201ENSMUST00000117508 635 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm14688-201ENSMUST00000119169 303 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm25913-201ENSMUST00000157617 135 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm25184-201ENSMUST00000157753 163 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm25718-201ENSMUST00000158632 118 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm25162-201ENSMUST00000158906 159 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm6374-201ENSMUST00000159051 788 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Mir3104-201ENSMUST00000174911 63 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm23638-201ENSMUST00000175073 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm23158-201ENSMUST00000175076 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm22907-201ENSMUST00000175198 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm22625-201ENSMUST00000175382 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm22875-201ENSMUST00000175449 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm25197-201ENSMUST00000175516 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm27857-201ENSMUST00000176930 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm26268-201ENSMUST00000177685 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm23681-201ENSMUST00000178821 126 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm27521-201ENSMUST00000184022 64 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm27940-201ENSMUST00000184449 98 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Mir6975-201ENSMUST00000184879 61 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm37603-201ENSMUST00000192368 219 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm45209-201ENSMUST00000207122 353 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm24316-201ENSMUST00000083041 107 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 AF357341-201ENSMUST00000083088 75 ntBASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim55G3X8Y1 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm25726-201ENSMUST00000104529 129 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm12190-201ENSMUST00000120001 187 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm13692-201ENSMUST00000120774 371 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm25384-201ENSMUST00000157807 105 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm19898-201ENSMUST00000177490 251 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Mir6933-201ENSMUST00000184982 81 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm38270-201ENSMUST00000192721 407 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm42832-201ENSMUST00000196361 745 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim55G3X8Y1 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm11065-201ENSMUST00000111462 228 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm15896-201ENSMUST00000118045 440 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm22814-201ENSMUST00000157452 104 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm25362-201ENSMUST00000158854 105 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm25121-201ENSMUST00000179846 79 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Mir6355-201ENSMUST00000183687 106 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm43855-201ENSMUST00000197462 507 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm44157-201ENSMUST00000204720 410 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm44266-201ENSMUST00000205235 500 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm45678-201ENSMUST00000210509 295 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Gm23845-201ENSMUST00000083834 152 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim55G3X8Y1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Trim55G3X8Y1 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms