Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Snora69-201ENSMUST00000083708 131 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.8□□□□□ -2.12
Chd3B1AR17 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm22478-201ENSMUST00000122570 154 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm22316-201ENSMUST00000158012 216 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm24677-201ENSMUST00000158755 150 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm23813-201ENSMUST00000175153 77 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Mir6541-201ENSMUST00000183649 110 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm29429-201ENSMUST00000187071 121 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Chd3B1AR17 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm13731-201ENSMUST00000117332 196 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm14677-201ENSMUST00000117866 486 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm11556-201ENSMUST00000120751 288 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Mir1954-201ENSMUST00000175595 86 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm20648-201ENSMUST00000175815 328 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm43043-201ENSMUST00000196579 412 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm45614-201ENSMUST00000209994 721 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.79□□□□□ -2.12
Chd3B1AR17 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.79□□□□□ -2.12
Chd3B1AR17 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Chd3B1AR17 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm24911-201ENSMUST00000157292 136 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm25368-201ENSMUST00000158847 131 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm24417-201ENSMUST00000178123 79 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm24653-201ENSMUST00000178541 79 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm25934-201ENSMUST00000178642 79 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Mir6371-201ENSMUST00000184470 111 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm18982-201ENSMUST00000198118 529 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm46312-201ENSMUST00000220961 420 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm24624-201ENSMUST00000082617 164 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Mir93-201ENSMUST00000083593 88 ntBASIC1.78□□□□□ -2.12
Chd3B1AR17 Gm29011-201ENSMUST00000191059 712 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm43193-201ENSMUST00000197732 441 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm45530-201ENSMUST00000211658 225 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm23939-201ENSMUST00000082880 133 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm25124-201ENSMUST00000083345 164 ntBASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
Chd3B1AR17 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm14566-201ENSMUST00000118915 321 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm14129-201ENSMUST00000122436 291 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm22693-201ENSMUST00000175049 442 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm22131-201ENSMUST00000178415 94 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm27544-201ENSMUST00000185069 155 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm37337-201ENSMUST00000192601 993 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Chd3B1AR17 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm26439-201ENSMUST00000082592 106 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.77□□□□□ -2.13
Chd3B1AR17 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Chd3B1AR17 Gm26143-201ENSMUST00000104480 108 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm6954-201ENSMUST00000117416 225 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm22755-201ENSMUST00000157143 100 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm5900-201ENSMUST00000179862 375 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm25120-201ENSMUST00000180148 79 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.76□□□□□ -2.13
Chd3B1AR17 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm19123-201ENSMUST00000190716 651 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm9373-201ENSMUST00000208724 599 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm46993-201ENSMUST00000220708 259 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm30738-201ENSMUST00000221346 502 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.76□□□□□ -2.13
Chd3B1AR17 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm27161-201ENSMUST00000183960 562 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Gm37119-201ENSMUST00000195691 389 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.76□□□□□ -2.13
Chd3B1AR17 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Chd3B1AR17 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Chd3B1AR17 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.75□□□□□ -2.13
Chd3B1AR17 Gm23783-201ENSMUST00000157941 102 ntBASIC1.75□□□□□ -2.13
Chd3B1AR17 Gm22483-201ENSMUST00000157986 274 ntBASIC1.75□□□□□ -2.13
Chd3B1AR17 Gm23760-201ENSMUST00000158350 116 ntBASIC1.75□□□□□ -2.13
Chd3B1AR17 Gm24773-201ENSMUST00000158513 99 ntBASIC1.75□□□□□ -2.13
Chd3B1AR17 Gm26960-201ENSMUST00000182263 412 ntBASIC1.75□□□□□ -2.13
Chd3B1AR17 Mir6338-201ENSMUST00000183389 109 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms