Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm17117-201ENSMUST00000163665 299 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm17186-201ENSMUST00000171742 456 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm23268-201ENSMUST00000175494 78 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm21638-201ENSMUST00000179473 836 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm27245-201ENSMUST00000184385 376 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Mir6405-201ENSMUST00000184584 124 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm29452-201ENSMUST00000187996 313 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm28860-201ENSMUST00000188103 313 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm37029-201ENSMUST00000195773 239 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm43704-201ENSMUST00000196164 496 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm43431-201ENSMUST00000198577 340 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm7039-201ENSMUST00000205138 346 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm7751-201ENSMUST00000212868 709 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm26446-201ENSMUST00000082455 103 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm26263-201ENSMUST00000083281 164 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.03
Trav1A0A075B5Z4 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm381-201ENSMUST00000117443 2037 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm24127-201ENSMUST00000104110 130 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm15167-201ENSMUST00000121997 187 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm15899-201ENSMUST00000128586 238 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm22416-201ENSMUST00000158590 88 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm25119-201ENSMUST00000158815 88 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm24264-201ENSMUST00000179835 94 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm27490-201ENSMUST00000184754 128 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm44526-201ENSMUST00000204664 121 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm44520-201ENSMUST00000205447 802 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm45879-201ENSMUST00000212521 392 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm2436-201ENSMUST00000219562 774 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm22245-201ENSMUST00000082479 103 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav1A0A075B5Z4 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26504-201ENSMUST00000102033 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snora36b-201ENSMUST00000104383 132 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24403-201ENSMUST00000104616 130 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm12191-201ENSMUST00000118307 348 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm9703-201ENSMUST00000119573 343 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm7327-201ENSMUST00000120925 652 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm14364-201ENSMUST00000129209 267 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23332-201ENSMUST00000157424 275 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23223-201ENSMUST00000158119 127 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm22611-201ENSMUST00000158288 150 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24546-201ENSMUST00000158652 102 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm20698-201ENSMUST00000175657 233 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26502-201ENSMUST00000177732 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm25350-201ENSMUST00000177849 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23446-201ENSMUST00000177977 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26201-201ENSMUST00000178047 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24711-201ENSMUST00000178062 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24609-201ENSMUST00000178166 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm23265-201ENSMUST00000178321 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm22812-201ENSMUST00000178329 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm26246-201ENSMUST00000178388 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm25155-201ENSMUST00000178450 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm24760-201ENSMUST00000178530 94 ntBASIC2.38□□□□□ -2.03
Trav1A0A075B5Z4 Gm22285-201ENSMUST00000178576 94 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms