Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 Gm19441-201ENSMUST00000221545 330 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
H2afb2S4R1M3 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.55□□□□□ -2
H2afb2S4R1M3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H2afb2S4R1M3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm12370-201ENSMUST00000117809 604 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm12803-201ENSMUST00000118907 821 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm15231-201ENSMUST00000119174 447 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm14841-201ENSMUST00000121067 758 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm16021-201ENSMUST00000121176 219 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm12368-201ENSMUST00000122251 434 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm15466-201ENSMUST00000122299 333 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm13901-201ENSMUST00000137252 468 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.54□□□□□ -2
H2afb2S4R1M3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm24784-201ENSMUST00000157640 62 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm24958-201ENSMUST00000158009 97 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm22521-201ENSMUST00000158272 134 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm24552-201ENSMUST00000158646 103 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm17119-201ENSMUST00000163943 280 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm20689-201ENSMUST00000176033 279 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm22631-201ENSMUST00000179656 94 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm11395-201ENSMUST00000181011 499 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Mir6341-201ENSMUST00000183490 121 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm8392-201ENSMUST00000185647 835 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm17946-201ENSMUST00000186856 538 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm28299-201ENSMUST00000189908 339 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm37771-201ENSMUST00000193121 265 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm9227-201ENSMUST00000194733 566 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm44391-201ENSMUST00000198490 93 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm44399-201ENSMUST00000205043 226 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Ear14-201ENSMUST00000049559 468 ntBASIC2.54□□□□□ -2
H2afb2S4R1M3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
H2afb2S4R1M3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
H2afb2S4R1M3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm12053-201ENSMUST00000119022 252 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm13368-201ENSMUST00000122443 430 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm22199-201ENSMUST00000122660 126 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm25283-201ENSMUST00000157272 77 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm23078-201ENSMUST00000157848 148 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.53□□□□□ -2
H2afb2S4R1M3 Mir7k-201ENSMUST00000184115 110 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm27249-201ENSMUST00000185049 328 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm19089-201ENSMUST00000197207 613 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm2676-201ENSMUST00000207279 606 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm7692-201ENSMUST00000213534 409 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.53□□□□□ -2
H2afb2S4R1M3 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm22061-201ENSMUST00000082557 107 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm26055-201ENSMUST00000083038 107 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm23097-201ENSMUST00000083448 105 ntBASIC2.53□□□□□ -2
H2afb2S4R1M3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
H2afb2S4R1M3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
H2afb2S4R1M3 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Mir466k-201ENSMUST00000116774 122 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm14918-201ENSMUST00000118153 268 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm12433-201ENSMUST00000119659 255 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm14159-201ENSMUST00000119832 451 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm22538-201ENSMUST00000158169 299 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm20534-201ENSMUST00000172957 172 ntBASIC2.52□□□□□ -2.01
H2afb2S4R1M3 Gm20450-201ENSMUST00000173652 147 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms