Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm23515-201ENSMUST00000082829 107 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm22974-201ENSMUST00000083301 103 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Gm23650-201ENSMUST00000083355 70 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Mir184-201ENSMUST00000083662 69 ntBASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
H2afb1S4R1E0 Snord14c-201ENSMUST00000101927 86 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm25764-201ENSMUST00000104092 134 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm22658-201ENSMUST00000104196 155 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm25848-201ENSMUST00000116790 144 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm15106-201ENSMUST00000119691 821 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm23332-201ENSMUST00000157424 275 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm24736-201ENSMUST00000158862 130 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm26195-201ENSMUST00000175035 101 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm18964-201ENSMUST00000193013 563 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Trbv24-201ENSMUST00000194614 347 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm8023-201ENSMUST00000195298 903 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm37029-201ENSMUST00000195773 239 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm5001-201ENSMUST00000204361 331 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm26446-201ENSMUST00000082455 103 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm26129-201ENSMUST00000082719 107 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.64□□□□□ -1.99
H2afb1S4R1E0 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm14364-201ENSMUST00000129209 267 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm25391-201ENSMUST00000157342 134 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm22187-201ENSMUST00000157819 129 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm25314-201ENSMUST00000178810 79 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm7858-201ENSMUST00000190177 622 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm1833-201ENSMUST00000191608 682 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm37353-201ENSMUST00000194497 313 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm43007-201ENSMUST00000197618 291 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm44520-201ENSMUST00000205447 802 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm18854-201ENSMUST00000211196 329 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm19786-201ENSMUST00000222589 580 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
H2afb1S4R1E0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.63□□□□□ -1.99
H2afb1S4R1E0 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm24118-201ENSMUST00000103972 126 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm22590-201ENSMUST00000104247 128 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm11221-201ENSMUST00000117230 597 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm13510-201ENSMUST00000118659 429 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm11229-201ENSMUST00000121993 437 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm15167-201ENSMUST00000121997 187 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm22225-201ENSMUST00000157358 278 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm22080-201ENSMUST00000157591 106 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm25977-201ENSMUST00000158697 85 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21842-201ENSMUST00000177552 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21626-201ENSMUST00000177791 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Mir5123-201ENSMUST00000177794 83 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21562-201ENSMUST00000177888 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21539-201ENSMUST00000177925 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17522-201ENSMUST00000178144 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21599-201ENSMUST00000178249 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21914-201ENSMUST00000178452 498 ntBASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
H2afb1S4R1E0 Gm21723-201ENSMUST00000178692 498 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms