Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 AC153964.2-201ENSMUST00000217704 2474 ntBASIC4.55□□□□□ -1.68
Nubp1Q9R060 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nubp1Q9R060 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm24350-201ENSMUST00000104163 133 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm14874-201ENSMUST00000118995 438 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm13737-201ENSMUST00000119793 232 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm24188-201ENSMUST00000157980 108 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm23872-201ENSMUST00000175432 77 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm29308-201ENSMUST00000188863 315 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm28537-201ENSMUST00000189026 315 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm28500-201ENSMUST00000190286 151 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm29631-201ENSMUST00000191065 315 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm45687-201ENSMUST00000209454 155 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Mecom-201ENSMUST00000061088 348 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm22299-201ENSMUST00000082663 136 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm25818-201ENSMUST00000083282 164 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.54□□□□□ -1.68
Nubp1Q9R060 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.54□□□□□ -1.68
Nubp1Q9R060 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nubp1Q9R060 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm26300-201ENSMUST00000102282 94 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm23608-201ENSMUST00000104545 128 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm13167-201ENSMUST00000118554 578 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm13232-201ENSMUST00000121816 632 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm25427-201ENSMUST00000157605 103 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm22557-201ENSMUST00000157804 102 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm23260-201ENSMUST00000158317 172 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm25369-201ENSMUST00000158848 132 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm44338-201ENSMUST00000198614 110 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.53□□□□□ -1.68
Nubp1Q9R060 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Nubp1Q9R060 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm22373-201ENSMUST00000104584 89 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm22036-201ENSMUST00000157279 215 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm25665-201ENSMUST00000157695 110 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm27396-201ENSMUST00000157708 58 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm22367-201ENSMUST00000178930 132 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm27492-201ENSMUST00000185194 187 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm29668-201ENSMUST00000187802 315 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm42666-201ENSMUST00000201954 152 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm26327-201ENSMUST00000093724 111 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.52□□□□□ -1.69
Nubp1Q9R060 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nubp1Q9R060 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Nubp1Q9R060 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Nubp1Q9R060 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Nubp1Q9R060 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Nubp1Q9R060 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms