Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Scn11aQ9R053 Snord14a-201ENSMUST00000082807 87 ntBASIC1.31□□□□□ -2.2
Scn11aQ9R053 Gm25759-201ENSMUST00000103988 129 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm22151-201ENSMUST00000116963 58 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm15067-201ENSMUST00000119534 156 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm26348-201ENSMUST00000157528 240 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm22390-201ENSMUST00000157588 325 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm26358-201ENSMUST00000158215 97 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm23180-201ENSMUST00000158686 125 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.3□□□□□ -2.2
Scn11aQ9R053 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm45456-201ENSMUST00000210841 243 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm24319-201ENSMUST00000083389 107 ntBASIC1.3□□□□□ -2.2
Scn11aQ9R053 Gm15530-201ENSMUST00000122206 555 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Scn11aQ9R053 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.29□□□□□ -2.2
Scn11aQ9R053 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Scn11aQ9R053 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Scn11aQ9R053 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.29□□□□□ -2.2
Scn11aQ9R053 Gm20534-201ENSMUST00000172957 172 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Gm27161-201ENSMUST00000183960 562 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Gm44962-201ENSMUST00000206460 279 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.29□□□□□ -2.2
Scn11aQ9R053 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.29□□□□□ -2.2
Scn11aQ9R053 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Scn11aQ9R053 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.28□□□□□ -2.2
Scn11aQ9R053 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm23321-201ENSMUST00000104465 126 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm13366-201ENSMUST00000122198 970 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm22037-201ENSMUST00000157280 296 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm25658-201ENSMUST00000158472 128 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm22431-201ENSMUST00000158545 107 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm20526-201ENSMUST00000173416 158 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm27582-201ENSMUST00000184084 126 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Gm18488-201ENSMUST00000215082 364 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.28□□□□□ -2.2
Scn11aQ9R053 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Scn11aQ9R053 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm14670-201ENSMUST00000117327 337 ntBASIC1.27□□□□□ -2.21
Scn11aQ9R053 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm19932-201ENSMUST00000177033 313 ntBASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm43652-201ENSMUST00000196219 675 ntBASIC1.27□□□□□ -2.21
Scn11aQ9R053 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Scn11aQ9R053 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.27□□□□□ -2.21
Scn11aQ9R053 Snord65-201ENSMUST00000104269 72 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm6113-201ENSMUST00000180319 639 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm27419-201ENSMUST00000184576 109 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm44666-201ENSMUST00000208544 391 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm24865-201ENSMUST00000103246 96 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm23705-201ENSMUST00000104370 130 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm14558-201ENSMUST00000117458 381 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm11854-201ENSMUST00000117839 446 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm24323-201ENSMUST00000175342 77 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm28552-201ENSMUST00000190725 388 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.26□□□□□ -2.21
Scn11aQ9R053 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Scn11aQ9R053 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 Gm25625-201ENSMUST00000157221 96 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 Gm8207-201ENSMUST00000171204 502 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.25□□□□□ -2.21
Scn11aQ9R053 Gm45173-201ENSMUST00000206819 305 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.25□□□□□ -2.21
Scn11aQ9R053 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Scn11aQ9R053 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm14428-201ENSMUST00000120408 822 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm25375-201ENSMUST00000158157 135 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Mir6383-201ENSMUST00000184545 116 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm13676-201ENSMUST00000122185 591 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm23324-201ENSMUST00000157421 131 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm27511-201ENSMUST00000183502 127 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm3010-201ENSMUST00000198805 448 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC1.24□□□□□ -2.21
Scn11aQ9R053 CT030030.1-201ENSMUST00000218809 152 ntBASIC1.24□□□□□ -2.21
Scn11aQ9R053 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Scn11aQ9R053 Mir27b-201ENSMUST00000083541 73 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 159.8 ms