Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.16□□□□□ -2.06
Trem1Q9JKE2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm12934-201ENSMUST00000119221 343 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm11352-201ENSMUST00000119264 517 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm25280-201ENSMUST00000157269 101 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm25339-201ENSMUST00000157458 232 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm25368-201ENSMUST00000158847 131 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm23370-202ENSMUST00000197008 129 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm18748-201ENSMUST00000198507 622 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm44254-201ENSMUST00000204184 322 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm9318-201ENSMUST00000222444 438 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.15□□□□□ -2.07
Trem1Q9JKE2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trem1Q9JKE2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm22936-201ENSMUST00000103955 126 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm11935-201ENSMUST00000118608 399 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm12458-201ENSMUST00000119387 495 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm15167-201ENSMUST00000121997 187 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm14770-201ENSMUST00000122197 312 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm24846-201ENSMUST00000158033 108 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm4468-201ENSMUST00000170206 294 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm26991-201ENSMUST00000180950 620 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm5329-201ENSMUST00000186898 463 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm19891-201ENSMUST00000189771 303 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm44609-201ENSMUST00000207157 460 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm45772-201ENSMUST00000212961 240 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm5670-201ENSMUST00000093546 372 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Gm23516-201ENSMUST00000093728 107 ntBASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trem1Q9JKE2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm15110-201ENSMUST00000117545 881 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm14652-201ENSMUST00000118479 235 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm24601-201ENSMUST00000157970 143 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Mir3964-201ENSMUST00000174898 74 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm24713-201ENSMUST00000178850 107 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm24137-201ENSMUST00000180055 79 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm25448-201ENSMUST00000180065 107 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm22391-201ENSMUST00000180356 79 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm44118-201ENSMUST00000204665 229 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.13□□□□□ -2.07
Trem1Q9JKE2 Gm23744-201ENSMUST00000104231 149 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm15215-201ENSMUST00000117773 489 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm12550-201ENSMUST00000118478 329 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm14359-201ENSMUST00000118883 424 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm14428-201ENSMUST00000120408 822 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm14360-201ENSMUST00000120670 393 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm9498-201ENSMUST00000140849 291 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm25961-201ENSMUST00000157174 135 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm22141-201ENSMUST00000157403 277 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm25557-201ENSMUST00000158084 315 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm16232-201ENSMUST00000162856 167 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm4076-201ENSMUST00000179230 965 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm44024-201ENSMUST00000203008 476 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm26166-201ENSMUST00000083788 107 ntBASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trem1Q9JKE2 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm14894-201ENSMUST00000117170 270 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm14852-201ENSMUST00000120065 647 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm25996-201ENSMUST00000175393 117 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Mir6408-201ENSMUST00000183643 91 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Mir6995-201ENSMUST00000183658 71 ntBASIC2.11□□□□□ -2.07
Trem1Q9JKE2 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.11□□□□□ -2.07
Trem1Q9JKE2 Gm37449-201ENSMUST00000193016 270 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms