Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm7329-201ENSMUST00000185915 210 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm28282-201ENSMUST00000186072 186 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm33354-201ENSMUST00000195448 906 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm25578-201ENSMUST00000083406 104 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm23136-201ENSMUST00000083425 99 ntBASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trim54Q9ERP3 Gm22939-201ENSMUST00000103958 131 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm6265-201ENSMUST00000149263 231 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm24780-201ENSMUST00000157635 143 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm24419-201ENSMUST00000157875 332 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm22611-201ENSMUST00000158288 150 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm23523-201ENSMUST00000180190 107 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm37081-201ENSMUST00000192034 196 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm44726-201ENSMUST00000203427 217 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 AF357341-201ENSMUST00000083088 75 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm3867-201ENSMUST00000086108 279 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Gm10212-201ENSMUST00000087884 324 ntBASIC3.4□□□□□ -1.87
Trim54Q9ERP3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm14823-201ENSMUST00000117698 238 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm12872-201ENSMUST00000121835 320 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm24787-201ENSMUST00000157380 123 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm22187-201ENSMUST00000157819 129 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm24086-201ENSMUST00000175171 98 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Mir5136-201ENSMUST00000175573 76 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm23725-201ENSMUST00000177876 107 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm24168-201ENSMUST00000178825 107 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm26622-201ENSMUST00000180520 298 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Mir6914-201ENSMUST00000184999 69 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm42647-201ENSMUST00000195939 459 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm6059-201ENSMUST00000196903 340 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Gm22970-201ENSMUST00000083304 186 ntBASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim54Q9ERP3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm13228-201ENSMUST00000118937 634 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm11556-201ENSMUST00000120751 288 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm25220-201ENSMUST00000157546 95 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm22836-201ENSMUST00000158441 61 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm23380-201ENSMUST00000158448 103 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm24019-201ENSMUST00000178620 107 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm26243-201ENSMUST00000179260 107 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm26914-201ENSMUST00000182262 223 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm28628-201ENSMUST00000187006 264 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm43083-201ENSMUST00000199594 476 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm44149-201ENSMUST00000204256 226 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm44060-201ENSMUST00000204440 410 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm18854-201ENSMUST00000211196 329 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm23296-201ENSMUST00000082555 107 ntBASIC3.38□□□□□ -1.87
Trim54Q9ERP3 Gm24859-201ENSMUST00000082729 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms